RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 WASH4PA8MWX3 477 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 H3BS24 57 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 PAPLNO95428 1278 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 CBX7O95931 251 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 MCM4P33991 863 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 NASPP49321 788 aaPredicted RBP5□□□□□ -1.61
CDKL5-208ENST00000624953 JAG1P78504 1218 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 UNC5AQ6ZN44 842 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 RUFY4Q6ZNE9 571 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 AFAP1Q8N556 730 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 FAM169BQ8N8A8 192 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 SLC6A18Q96N87 628 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 G6PC3Q9BUM1 346 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 SRRTQ9BXP5 876 aaKnown RBP5□□□□□ -1.61
CDKL5-208ENST00000624953 ZNF214Q9UL59 606 aaPredicted RBP5□□□□□ -1.61
CDKL5-208ENST00000624953 ARHGAP35Q9NRY4 1499 aa5□□□□□ -1.61
CDKL5-208ENST00000624953 IQGAP1P46940 1657 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 NPATQ14207 1427 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 SYCP2Q9BX26 1530 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 A0A1W2PQH9 124 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 PLEKHD1A6NEE1 506 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 FAM155AB1AL88 458 aaPredicted RBP4.99□□□□□ -1.61
CDKL5-208ENST00000624953 C9IYK1 514 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 E9PSI1 815 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 CLEC3AO75596 197 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 TEKQ02763 1124 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 SNW1Q13573 536 aaKnown RBP4.99□□□□□ -1.61
CDKL5-208ENST00000624953 CDKAL1Q5VV42 579 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 CCDC81Q6ZN84 652 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 ATG4DQ86TL0 474 aaPredicted RBP4.99□□□□□ -1.61
CDKL5-208ENST00000624953 ZNF513Q8N8E2 541 aaPredicted RBP4.99□□□□□ -1.61
CDKL5-208ENST00000624953 DAGLBQ8NCG7 672 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 LRRN4CLQ8ND94 238 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 KLHL6Q8WZ60 621 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 SMARCC1Q92922 1105 aaPredicted RBP4.99□□□□□ -1.61
CDKL5-208ENST00000624953 KCNH3Q9ULD8 1083 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 CTNND2Q9UQB3 1225 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 INPP5FQ9Y2H2 1132 aa4.99□□□□□ -1.61
CDKL5-208ENST00000624953 TROQ12816 1431 aaPredicted RBP4.98□□□□□ -1.61
CDKL5-208ENST00000624953 PTPRKQ15262 1439 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 ATP7AQ04656 1500 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 DEPDC5O75140 1603 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 RNF17Q9BXT8 1623 aaKnown RBP4.98□□□□□ -1.61
CDKL5-208ENST00000624953 CBFA2T2O43439 604 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 SIGLEC6O43699 453 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 GBP1P32455 592 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 EIF6P56537 245 aaKnown RBP4.98□□□□□ -1.61
CDKL5-208ENST00000624953 NMIQ13287 307 aaPredicted RBP4.98□□□□□ -1.61
CDKL5-208ENST00000624953 ARHGAP27Q6ZUM4 889 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 TMC3Q7Z5M5 1100 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 MCF2L2Q86YR7 1114 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 UBE2FQ969M7 185 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 C8orf37Q96NL8 207 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 FERD3LQ96RJ6 166 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 PRDM14Q9GZV8 571 aa4.98□□□□□ -1.61
CDKL5-208ENST00000624953 TRIT1Q9H3H1 467 aaKnown RBP4.98□□□□□ -1.61
CDKL5-208ENST00000624953 SYNMO15061 1565 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 TPP2P29144 1249 aaPredicted RBP4.97□□□□□ -1.61
CDKL5-208ENST00000624953 HSPA1LP34931 641 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 RANGAP1P46060 587 aaPredicted RBP4.97□□□□□ -1.61
CDKL5-208ENST00000624953 ZP2Q05996 745 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 IKZF1Q13422 519 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 PLCL1Q15111 1095 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 BBS9Q3SYG4 887 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 TTC6Q86TZ1 520 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 ZNF655Q8N720 491 aaPredicted RBP4.97□□□□□ -1.61
CDKL5-208ENST00000624953 LINC00116Q8NCU8 138 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 DHRS1Q96LJ7 313 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 CARS2Q9HA77 564 aaKnown RBP4.97□□□□□ -1.61
CDKL5-208ENST00000624953 GPATCH2Q9NW75 528 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 ZSWIM5Q9P217 1185 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 SUSD2Q9UGT4 822 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 EBF1Q9UH73 591 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.97□□□□□ -1.61
CDKL5-208ENST00000624953 CEP152O94986 1710 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 UBR1Q8IWV7 1749 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 CPS1P31327 1500 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 CNTLNQ9NXG0 1405 aa4.97□□□□□ -1.61
CDKL5-208ENST00000624953 ZMYM3Q14202 1370 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 TMEM82A0PJX8 343 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 CAPNS1P04632 268 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 C8AP07357 584 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 ZGLP1P0C6A0 271 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 JUNBP17275 347 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-208ENST00000624953 GDNFP39905 211 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 CTSKP43235 329 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 AUHQ13825 339 aaKnown RBP4.96□□□□□ -1.62
CDKL5-208ENST00000624953 NR0B2Q15466 257 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 AXDND1Q5T1B0 1012 aaPredicted RBP4.96□□□□□ -1.62
CDKL5-208ENST00000624953 C7orf61Q8IZ16 206 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 USHBP1Q8N6Y0 703 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 LINC01599Q8WXQ3 324 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 ALPK1Q96QP1 1244 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 KLHL25Q9H0H3 589 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 PHAXQ9H814 394 aaKnown RBP4.96□□□□□ -1.62
CDKL5-208ENST00000624953 PCDHA11Q9Y5I1 949 aa4.96□□□□□ -1.62
CDKL5-208ENST00000624953 SLC12A7Q9Y666 1083 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms