RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GUCY2DQ02846 1103 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 ODF2Q5BJF6 829 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 CYB5D1Q6P9G0 228 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 TRIM58Q8NG06 486 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 EPB41L5Q9HCM4 733 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
PMS1-221ENST00000624204 CAPN11Q9UMQ6 739 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 TBC1D2BQ9UPU7 963 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 STK36Q9NRP7 1315 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 A0A1B0GUA9 196 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 WNT7AO00755 349 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 KDM7AQ6ZMT4 941 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 SGMS1Q86VZ5 419 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 OSBPL9Q96SU4 736 aa16.89■□□□□ 0.29
PMS1-221ENST00000624204 TRIM6Q9C030 488 aaPredicted RBP16.89■□□□□ 0.29
PMS1-221ENST00000624204 ATXN2Q99700 1313 aaKnown RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 NUTM2BA6NNL0 878 aaPredicted RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 LGALS16A8MUM7 142 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 NUTM2EB1AL46 878 aaPredicted RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 MDH1P40925 334 aaKnown RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 IFIH1Q9BYX4 1025 aaKnown RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 NAPBQ9H115 298 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 RBM12Q9NTZ6 932 aaKnown RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 DIP2BQ9P265 1576 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 SNAP23O00161 211 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 PPP1R12AO14974 1030 aaPredicted RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 TYW1BQ6NUM6 668 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 MS4A14Q96JA4 679 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.88■□□□□ 0.29
PMS1-221ENST00000624204 BAZ2BQ9UIF8 2168 aaKnown RBP16.88■□□□□ 0.29
PMS1-221ENST00000624204 TSPOAP1O95153 1857 aa16.88■□□□□ 0.29
PMS1-221ENST00000624204 ERICH2A1L162 156 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 WTAPQ15007 396 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 YTHDF3Q7Z739 585 aaKnown RBP16.87■□□□□ 0.29
PMS1-221ENST00000624204 FAXDC2Q96IV6 333 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 GOLGA6L10A6NI86 522 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 FAM107AO95990 144 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 CRACR2BQ8N4Y2 399 aaPredicted RBP16.87■□□□□ 0.29
PMS1-221ENST00000624204 PLBD2Q8NHP8 589 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 CYFIP2Q96F07 1278 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
PMS1-221ENST00000624204 MINDY4BA8MYZ0 360 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 BUB1O43683 1085 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 HEXIM1O94992 359 aaKnown RBP16.87■□□□□ 0.29
PMS1-221ENST00000624204 PTGDRQ13258 359 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 IRF2BP1Q8IU81 584 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 SLC52A2Q9HAB3 445 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
PMS1-221ENST00000624204 ZNF532Q9HCE3 1301 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 H7C1W4 665 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 OPLAHO14841 1288 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 RPN1P04843 607 aaKnown RBP16.86■□□□□ 0.29
PMS1-221ENST00000624204 GLI1P08151 1106 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 PMS1P54277 932 aaKnown RBP16.86■□□□□ 0.29
PMS1-221ENST00000624204 SPRED3Q2MJR0 410 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 IFT20Q8IY31 132 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 FUKQ8N0W3 1084 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 TPX2Q9ULW0 747 aaKnown RBP16.86■□□□□ 0.29
PMS1-221ENST00000624204 HYOU1Q9Y4L1 999 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 H7C1D1 291 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 HLTFQ14527 1009 aaKnown RBP eCLIP16.86■□□□□ 0.291e-6■■■□□ 16.5
PMS1-221ENST00000624204 ZNF658Q5TYW1 1059 aaPredicted RBP16.86■□□□□ 0.29
PMS1-221ENST00000624204 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 ALS2CR12Q96Q35 445 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
PMS1-221ENST00000624204 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 XBP1P17861 261 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 LIFRP42702 1097 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 FMNL3Q8IVF7 1028 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 C4AP0C0L4 1744 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 C4BP0C0L5 1744 aa16.86■□□□□ 0.29
PMS1-221ENST00000624204 AKR1B10O60218 316 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 ADD2P35612 726 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 MCAMP43121 646 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 FERMT2Q96AC1 680 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 ATP6V1G3Q96LB4 118 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 BAIAP2L1Q9UHR4 511 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 TNRQ92752 1358 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 TCP1P17987 556 aaKnown RBP16.85■□□□□ 0.29
PMS1-221ENST00000624204 MCM7P33993 719 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 KRT2P35908 639 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 WLSQ5T9L3 541 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 MFSD6Q6ZSS7 791 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 SGSM3Q96HU1 749 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 MTRQ99707 1265 aa16.85■□□□□ 0.29
PMS1-221ENST00000624204 DNM1LO00429 736 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 ZNF263O14978 683 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 MYBL1P10243 752 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 ARID5AQ03989 594 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 PAK2Q13177 524 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
PMS1-221ENST00000624204 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms