RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 KCND1Q9NSA2 647 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 VPS54Q9P1Q0 977 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 KCNJ14Q9UNX9 436 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 CLIC4Q9Y696 253 aa17.25■□□□□ 0.35
ATRX-211ENST00000623321 A0A1W2PRG0 241 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 KIF28PB7ZC32 967 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 SPTLC2O15270 562 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATRX-211ENST00000623321 GNL2Q13823 731 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 PHF20Q9BVI0 1012 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 SH3GLB2Q9NR46 395 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 CTNND1O60716 968 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 SLC1A4P43007 532 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 SF3A1Q15459 793 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 TPD52L1Q16890 204 aaPredicted RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 DIS3L2Q8IYB7 885 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 SHISA4Q96DD7 197 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 RRP36Q96EU6 259 aaKnown RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 GMCL1Q96IK5 515 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 SDF4Q9BRK5 362 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 ZNF341Q9BYN7 854 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 FOXP1Q9H334 677 aaPredicted RBP17.24■□□□□ 0.35
ATRX-211ENST00000623321 CPVLQ9H3G5 476 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 KIAA1468Q9P260 1216 aa17.24■□□□□ 0.35
ATRX-211ENST00000623321 RAD21O60216 631 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 GSDMDP57764 484 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 CCZ1BP86790 482 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 CCZ1P86791 482 aaPredicted RBP17.23■□□□□ 0.35
ATRX-211ENST00000623321 SUPT20HL1Q3ZLR7 823 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 PRAMEF18Q5VWM3 479 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
ATRX-211ENST00000623321 BTBD18B2RXH4 712 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 NDUFB10O96000 172 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 EPHX2P34913 555 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 ECE1P42892 770 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 ANO1Q5XXA6 986 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 ACER1Q8TDN7 264 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 IMPACTQ9P2X3 320 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 SEC63Q9UGP8 760 aaKnown RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 BAZ2BQ9UIF8 2168 aaKnown RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 A0A087WWV3 80 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 CMA1P23946 247 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 SULF1Q8IWU6 871 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 ZC3H15Q8WU90 426 aaKnown RBP17.22■□□□□ 0.35
ATRX-211ENST00000623321 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
ATRX-211ENST00000623321 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 SKILP12757 684 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 KRT2P35908 639 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 NLRP5P59047 1200 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 NCBP1Q09161 790 aaKnown RBP17.21■□□□□ 0.35
ATRX-211ENST00000623321 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 PIGSQ96S52 555 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 BRMS1Q9HCU9 246 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 BARHL2Q9NY43 387 aa17.21■□□□□ 0.35
ATRX-211ENST00000623321 BMP3P12645 472 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 CALML3P27482 149 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 NLRP12P59046 1061 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 ARID5BQ14865 1188 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
ATRX-211ENST00000623321 DPCR1Q3MIW9 517 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 CEP135Q66GS9 1140 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 WWC2Q6AWC2 1192 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 HEATR3Q7Z4Q2 680 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 GPKOWQ92917 476 aaPredicted RBP eCLIP17.2■□□□□ 0.34
ATRX-211ENST00000623321 TIGD1Q96MW7 591 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.2■□□□□ 0.34
ATRX-211ENST00000623321 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
ATRX-211ENST00000623321 INPP5BP32019 993 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 SLC16A2P36021 539 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 DHX8Q14562 1220 aaKnown RBP17.2■□□□□ 0.34
ATRX-211ENST00000623321 SLC39A14Q15043 492 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 CCDC148Q8NFR7 591 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 ERCC4Q92889 916 aaPredicted RBP17.2■□□□□ 0.34
ATRX-211ENST00000623321 ARID3AQ99856 593 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
ATRX-211ENST00000623321 ATAD5Q96QE3 1844 aa17.19■□□□□ 0.34
ATRX-211ENST00000623321 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
ATRX-211ENST00000623321 hCG_1984214I3L0E3 225 aa17.19■□□□□ 0.34
ATRX-211ENST00000623321 STXBP3O00186 592 aa17.19■□□□□ 0.34
ATRX-211ENST00000623321 ZNF202O95125 648 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms