RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CACNB3P54284 484 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 ATP2B2Q01814 1243 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 SPATA20Q8TB22 786 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 RAB34Q9BZG1 259 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 JMJD4Q9H9V9 463 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 VAT1LQ9HCJ6 419 aa18.56■□□□□ 0.56
LDB3-208ENST00000623007 ZNF500O60304 480 aaPredicted RBP18.55■□□□□ 0.56
LDB3-208ENST00000623007 GCFC2P16383 781 aaKnown RBP18.55■□□□□ 0.56
LDB3-208ENST00000623007 EIF6P56537 245 aaKnown RBP18.55■□□□□ 0.56
LDB3-208ENST00000623007 DPCR1Q3MIW9 517 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 CCSER1Q9C0I3 900 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 UBA5Q9GZZ9 404 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 GPCPD1Q9NPB8 672 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 RMND1Q9NWS8 449 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 SERTAD1Q9UHV2 236 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 PCDHA5Q9Y5H7 936 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 SRCAPQ6ZRS2 3230 aa18.55■□□□□ 0.56
LDB3-208ENST00000623007 BAZ2BQ9UIF8 2168 aaKnown RBP18.55■□□□□ 0.56
LDB3-208ENST00000623007 NEMFO60524 1076 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 VEGFAP15692 232 aaPredicted RBP18.54■□□□□ 0.56
LDB3-208ENST00000623007 HOXA7P31268 230 aaPredicted RBP18.54■□□□□ 0.56
LDB3-208ENST00000623007 MYL5Q02045 173 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 PNOCQ13519 176 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 INF2Q27J81 1249 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 AOPEPQ8N6M6 819 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 C4orf32Q8N8J7 132 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 GOPCQ9HD26 462 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 ZBTB7AO95365 584 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 OR52Z1P0C646 297 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 GRIN1Q05586 938 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 SEPT2Q15019 361 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 SH3RF1Q7Z6J0 888 aa18.54■□□□□ 0.56
LDB3-208ENST00000623007 ARFGEF1Q9Y6D6 1849 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 F5H6K3 240 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 CBFA2T2O43439 604 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 SLC26A4O43511 780 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
LDB3-208ENST00000623007 CXCL9Q07325 125 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 KLRC3Q07444 240 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 SPECC1Q5M775 1068 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 BTNL9Q6UXG8 535 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 DHX58Q96C10 678 aa18.53■□□□□ 0.56
LDB3-208ENST00000623007 ZBED3Q96IU2 234 aaPredicted RBP18.53■□□□□ 0.56
LDB3-208ENST00000623007 UBA7P41226 1012 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 ZNF280AP59817 542 aaPredicted RBP18.52■□□□□ 0.56
LDB3-208ENST00000623007 MAP3K10Q02779 954 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 AP3B2Q13367 1082 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 TMEM266Q2M3C6 531 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 PPP4R3AQ6IN85 833 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 DRC7Q8IY82 874 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 DPF2Q92785 391 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 HOOK2Q96ED9 719 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 EPSTI1Q96J88 318 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 IMPACTQ9P2X3 320 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 PCDHAC2Q9Y5I4 1007 aa18.52■□□□□ 0.56
LDB3-208ENST00000623007 TCP10L2B9ZVM9 353 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 CCNT1O60563 726 aaKnown RBP18.51■□□□□ 0.55
LDB3-208ENST00000623007 PLA2G6O60733 806 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 BMP3P12645 472 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 MORC3Q14149 939 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 PDILTQ8N807 584 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 TBCKQ8TEA7 893 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 AMNQ9BXJ7 453 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
LDB3-208ENST00000623007 BIN1O00499 593 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 FOSP01100 380 aaPredicted RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 GH2P01242 217 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 CLK2P49760 499 aaKnown RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 E2F4Q16254 413 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 LETM2Q2VYF4 491 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 MOXD1Q6UVY6 613 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 RASGRP4Q8TDF6 673 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 PAGE5Q96GU1 130 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 MYOZ2Q9NPC6 264 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 MAN1B1Q9UKM7 699 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 GTPBP6O43824 516 aaPredicted RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 ASNSP08243 561 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 STAT6P42226 847 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 USP11P51784 963 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 GSDMDP57764 484 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 PDIA5Q14554 519 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 KCTD1Q719H9 257 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 ENOX1Q8TC92 643 aaKnown RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 CCDC47Q96A33 483 aaKnown RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 DISC1Q9NRI5 854 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 ATF5Q9Y2D1 282 aaPredicted RBP18.5■□□□□ 0.55
LDB3-208ENST00000623007 TMX2Q9Y320 296 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 STK24Q9Y6E0 443 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 COL4A5P29400 1685 aa18.5■□□□□ 0.55
LDB3-208ENST00000623007 CNTNAP1P78357 1384 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 NDUFB10O96000 172 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 PPP1R2P41236 205 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 AMPD3Q01432 767 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 RASSF8Q8NHQ8 419 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 CHURC1Q8WUH1 139 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 LRRC27Q9C0I9 530 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 VEZTQ9HBM0 779 aa18.49■□□□□ 0.55
LDB3-208ENST00000623007 RRAGDQ9NQL2 400 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms