RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 RANBP17Q9H2T7 1088 aaKnown RBP20.52■□□□□ 0.88
PTCHD3-202ENST00000622555 NLRP5P59047 1200 aa20.51■□□□□ 0.87
PTCHD3-202ENST00000622555 TYW1BQ6NUM6 668 aa20.51■□□□□ 0.87
PTCHD3-202ENST00000622555 CCDC174Q6PII3 467 aa20.51■□□□□ 0.87
PTCHD3-202ENST00000622555 CCDC12Q8WUD4 166 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3-202ENST00000622555 COL11A1P12107 1806 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3-202ENST00000622555 SMCHD1A6NHR9 2005 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 ZBTB48P10074 688 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 ZNF157P51786 506 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 GTF2A2P52657 109 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 GNL2Q13823 731 aaKnown RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 FBXO11Q86XK2 927 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 TNPO1Q92973 898 aaKnown RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 AMNQ9BXJ7 453 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 ABT1Q9ULW3 272 aaKnown RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 AGTPBP1Q9UPW5 1226 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 TLL2Q9Y6L7 1015 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 TMEM88BA6NKF7 163 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 CETPP11597 493 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 MOGSQ13724 837 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 COG2Q14746 738 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 FAM177A1Q8N128 213 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 CTDP1Q9Y5B0 961 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 PCDHA1Q9Y5I3 950 aa20.5■□□□□ 0.87
PTCHD3-202ENST00000622555 MYH15Q9Y2K3 1946 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 CALML3P27482 149 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 DSG3P32926 999 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 KIF23Q02241 960 aaPredicted RBP20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 RESTQ13127 1097 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 USH1GQ495M9 461 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 RGMBQ6NW40 437 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 RASAL3Q86YV0 1011 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 DIS3L2Q8IYB7 885 aaKnown RBP20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 BRMS1Q9HCU9 246 aa20.49■□□□□ 0.87
PTCHD3-202ENST00000622555 ZBED4O75132 1171 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 HOXA7P31268 230 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 KRT2P35908 639 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 IRX3P78415 501 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 PPP1R18Q6NYC8 613 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 ZSCAN16Q9H4T2 348 aaPredicted RBP20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 SLC38A10Q9HBR0 1119 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 HOXC10Q9NYD6 342 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 MYPNQ86TC9 1320 aa20.48■□□□□ 0.87
PTCHD3-202ENST00000622555 CCL15-CCL14A0A0B4J2E2 113 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 BTBD18B2RXH4 712 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 KIF28PB7ZC32 967 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 VWA5AO00534 786 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 FDX1P10109 184 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 TRAF1Q13077 416 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 CCL15Q16663 113 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 C6orf50Q9HD87 102 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 ATP6V1DQ9Y5K8 247 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 TCHHQ07283 1943 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 PABPC4Q13310 644 aaKnown RBP eCLIP20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 NPY5RQ15761 445 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 GALNT17Q6IS24 598 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 GPAT2Q6NUI2 795 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 OXER1Q8TDS5 423 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 ZMYND12Q9H0C1 365 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 PCDHA4Q9UN74 947 aa20.47■□□□□ 0.87
PTCHD3-202ENST00000622555 ESYT2A0FGR8 921 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 SPDYE16A6NNV3 312 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 ICAM1P05362 532 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 TAL1P17542 331 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 GNA11P29992 359 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 ADCY7P51828 1080 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 BLIDQ8IZY5 108 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 CPXCR1Q8N123 301 aa20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 ASCC2Q9H1I8 757 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 FOXP1Q9H334 677 aaPredicted RBP20.46■□□□□ 0.87
PTCHD3-202ENST00000622555 OSBPP22059 807 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 U2AF2P26368 475 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 NR5A1Q13285 461 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 BRAPQ7Z569 592 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 DAGLBQ8NCG7 672 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 BRI3BPQ8WY22 251 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 AGBL1Q96MI9 1066 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 RAVER2Q9HCJ3 691 aaKnown RBP20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 CCPG1Q9ULG6 757 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 ADAMTS5Q9UNA0 930 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 ZNF536O15090 1300 aa20.45■□□□□ 0.86
PTCHD3-202ENST00000622555 SLC10A3P09131 477 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 FAM173BQ6P4H8 233 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 P2RX7Q99572 595 aaKnown RBP20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 A0A0G2JMZ2 1700 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 ADAMTS3O15072 1205 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 NOSTRINQ8IVI9 506 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 BICD2Q8TD16 824 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 CHAMP1Q96JM3 812 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 PSTPIP2Q9H939 334 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 RIC8AQ9NPQ8 531 aa20.44■□□□□ 0.86
PTCHD3-202ENST00000622555 ABCB11O95342 1321 aa20.43■□□□□ 0.86
PTCHD3-202ENST00000622555 BTBD19C9JJ37 291 aa20.43■□□□□ 0.86
PTCHD3-202ENST00000622555 REPS2Q8NFH8 660 aa20.43■□□□□ 0.86
PTCHD3-202ENST00000622555 CUL5Q93034 780 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms