RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 BMP3P12645 472 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 RAG1P15918 1043 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 TFAP4Q01664 338 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 PDE4BQ07343 736 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 ARMCX2Q7L311 632 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 ANKRD35Q8N283 1001 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 NUP133Q8WUM0 1156 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 GMCL1Q96IK5 515 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 TOX2Q96NM4 488 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 KATNBL1Q9H079 304 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 NAPBQ9H115 298 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 SEMA6BQ9H3T3 888 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 HOMER2Q9NSB8 354 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 TMEM39AQ9NV64 488 aa18.25■□□□□ 0.51
GTF2I-220ENST00000621640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
GTF2I-220ENST00000621640 ZNF536O15090 1300 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 MCM3APO60318 1980 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 TMEM232C9JQI7 657 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 STAT2P52630 851 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 CCDC144BQ3MJ40 725 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.24■□□□□ 0.51
GTF2I-220ENST00000621640 RNPC3Q96LT9 517 aaKnown RBP18.24■□□□□ 0.51
GTF2I-220ENST00000621640 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
GTF2I-220ENST00000621640 ABHD16BQ9H3Z7 469 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 TBX21Q9UL17 535 aa18.24■□□□□ 0.51
GTF2I-220ENST00000621640 DCDC2CA8MYV0 355 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 CTAGE5O15320 804 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 SLC3A2P08195 630 aaKnown RBP18.23■□□□□ 0.51
GTF2I-220ENST00000621640 C6orf222P0C671 652 aaPredicted RBP18.23■□□□□ 0.51
GTF2I-220ENST00000621640 MX1P20591 662 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 FPGSQ05932 587 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 RASGRP2Q7LDG7 609 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 CCDC144CPQ8IYA2 1237 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 FAM133AQ8N9E0 248 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 AGBL1Q96MI9 1066 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 A1CFQ9NQ94 594 aaKnown RBP18.23■□□□□ 0.51
GTF2I-220ENST00000621640 INCENPQ9NQS7 918 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 SPTBN5Q9NRC6 3674 aaKnown RBP18.23■□□□□ 0.51
GTF2I-220ENST00000621640 ELP1O95163 1332 aa18.23■□□□□ 0.51
GTF2I-220ENST00000621640 ASGR1P07306 291 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 FDX1P10109 184 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 CDK7P50613 346 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 GJA9P57773 515 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 CHMP4CQ96CF2 233 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 ACAD9Q9H845 621 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 ISY1Q9ULR0 285 aaKnown RBP18.22■□□□□ 0.51
GTF2I-220ENST00000621640 ASTN1O14525 1302 aa18.22■□□□□ 0.51
GTF2I-220ENST00000621640 LRRC37A2A6NM11 1700 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 SOWAHBA6NEL2 793 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 NMT2O60551 498 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 MCCP23508 829 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 SLC1A4P43007 532 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 NKX3-2P78367 333 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 VPS53Q5VIR6 699 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 FAM160B2Q86V87 743 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 STAG1Q8WVM7 1258 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 GLT1D1Q96MS3 346 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 COL25A1Q9BXS0 654 aaPredicted RBP18.21■□□□□ 0.51
GTF2I-220ENST00000621640 RNF146Q9NTX7 359 aa18.21■□□□□ 0.51
GTF2I-220ENST00000621640 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.2■□□□□ 0.5
GTF2I-220ENST00000621640 PLA2G6O60733 806 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 TIMP1P01033 207 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 IKQ13123 557 aaPredicted RBP18.2■□□□□ 0.5
GTF2I-220ENST00000621640 KCTD1Q719H9 257 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 PCSK9Q8NBP7 692 aaKnown RBP18.2■□□□□ 0.5
GTF2I-220ENST00000621640 MAFAQ8NHW3 353 aaPredicted RBP18.2■□□□□ 0.5
GTF2I-220ENST00000621640 CHURC1Q8WUH1 139 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 MYLIPQ8WY64 445 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 SPC25Q9HBM1 224 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 DDX49Q9Y6V7 483 aaKnown RBP18.2■□□□□ 0.5
GTF2I-220ENST00000621640 MROH7Q68CQ1 1323 aa18.2■□□□□ 0.5
GTF2I-220ENST00000621640 TSPY2A6NKD2 308 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 NOVP48745 357 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 SNAP25P60880 206 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 TKFCQ3LXA3 575 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 GNASQ5JWF2 1037 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 ANAPC4Q9UJX5 808 aa18.19■□□□□ 0.5
GTF2I-220ENST00000621640 CHD9Q3L8U1 2897 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 TMEM265A0A087WTH1 108 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 A0A0U1RQG5 324 aaPredicted RBP18.18■□□□□ 0.5
GTF2I-220ENST00000621640 ARVCFO00192 962 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 PTGS1P23219 599 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 BEX3Q00994 111 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 MUM1L1Q5H9M0 696 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 PPP4R3BQ5MIZ7 849 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 RCSD1Q6JBY9 416 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 MFSD5Q6N075 450 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 CCDC174Q6PII3 467 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 FAM126BQ8IXS8 530 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 TRERF1Q96PN7 1200 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.5
GTF2I-220ENST00000621640 PRR12Q9ULL5 1215 aa18.18■□□□□ 0.5
GTF2I-220ENST00000621640 ALAS1P13196 640 aa18.17■□□□□ 0.5
GTF2I-220ENST00000621640 TNFAIP2Q03169 654 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms