RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PTCH2Q9Y6C5 1203 aa16.7■□□□□ 0.26
CBWD3-217ENST00000621474 APOBRQ0VD83 1088 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 CCDC174Q6PII3 467 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 PLEKHH3Q7Z736 793 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 MICU3Q86XE3 530 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 NCAPG2Q86XI2 1143 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 COA7Q96BR5 231 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 MTMR8Q96EF0 704 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
CBWD3-217ENST00000621474 SLC25A27O95847 323 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 ICAM1P05362 532 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 PTPREP23469 700 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 EVCP57679 992 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 GRB14Q14449 540 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 ARHGEF6Q15052 776 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 PKN2Q16513 984 aaKnown RBP16.68■□□□□ 0.26
CBWD3-217ENST00000621474 FBXO46Q6PJ61 603 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-217ENST00000621474 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 MROH8Q9H579 483 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 RIOX1Q9H6W3 641 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 FAM217BQ9NTX9 383 aaPredicted RBP16.68■□□□□ 0.26
CBWD3-217ENST00000621474 HPS5Q9UPZ3 1129 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 NID2Q14112 1375 aa16.68■□□□□ 0.26
CBWD3-217ENST00000621474 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 PLEKHA8P1O95397 391 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CDC37Q16543 378 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 WDR78Q5VTH9 848 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CALM1P0DP23 149 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CALM2P0DP24 149 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CALM3P0DP25 149 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 HOXD10P28358 340 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 PRMT2P55345 433 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 IRF5Q13568 498 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 QRICH1Q2TAL8 776 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CMTR1Q8N1G2 835 aaKnown RBP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 SRBD1Q8N5C6 995 aaKnown RBP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 CTCFLQ8NI51 663 aaPredicted RBP16.67■□□□□ 0.26
CBWD3-217ENST00000621474 C22orf23Q9BZE7 217 aa16.67■□□□□ 0.26
CBWD3-217ENST00000621474 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
CBWD3-217ENST00000621474 ZBTB43O43298 467 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
CBWD3-217ENST00000621474 ADORA2AP29274 412 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 CDC27P30260 824 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 RCAN1P53805 252 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 MUM1L1Q5H9M0 696 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 CCAR1Q8IX12 1150 aaKnown RBP16.66■□□□□ 0.26
CBWD3-217ENST00000621474 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 NUDT12Q9BQG2 462 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 VAT1LQ9HCJ6 419 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 HOMER2Q9NSB8 354 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 CCPG1Q9ULG6 757 aa16.66■□□□□ 0.26
CBWD3-217ENST00000621474 CTDP1Q9Y5B0 961 aaPredicted RBP16.66■□□□□ 0.26
CBWD3-217ENST00000621474 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
CBWD3-217ENST00000621474 SLC15A5A6NIM6 579 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 STRNO43815 780 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 KIF5BP33176 963 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 COPB2P35606 906 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 SLC4A3P48751 1232 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 FGD1P98174 961 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 TMTC3Q6ZXV5 915 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 ABRAQ8N0Z2 381 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
CBWD3-217ENST00000621474 SPZ1Q9BXG8 430 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
CBWD3-217ENST00000621474 COBLO75128 1261 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 IGHA2P01877 340 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 HOXC6P09630 235 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 ALAS1P13196 640 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 FUT2Q10981 343 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 CHST13Q8NET6 341 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 NPLOC4Q8TAT6 608 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 RAET1EQ8TD07 263 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 TRERF1Q96PN7 1200 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 PIGSQ96S52 555 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 ALDH8A1Q9H2A2 487 aaPredicted RBP16.64■□□□□ 0.25
CBWD3-217ENST00000621474 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 IVNS1ABPQ9Y6Y0 642 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 MCM3APO60318 1980 aa16.64■□□□□ 0.25
CBWD3-217ENST00000621474 DNAJC25-GNG10A0A024R161 153 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 GOLGA8BA8MQT2 603 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 NFIBO00712 420 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 ZBTB5O15062 677 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 DHX16O60231 1041 aaKnown RBP16.63■□□□□ 0.25
CBWD3-217ENST00000621474 PGK2P07205 417 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 FCER1AP12319 257 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
CBWD3-217ENST00000621474 ELNP15502 786 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 CYP2B6P20813 491 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 SMARCA1P28370 1054 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 PDIA3P30101 505 aaKnown RBP16.63■□□□□ 0.25
CBWD3-217ENST00000621474 CCL14Q16627 93 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 CLEC4DQ8WXI8 215 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 TRIB2Q92519 343 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 MMP19Q99542 508 aa16.63■□□□□ 0.25
CBWD3-217ENST00000621474 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms