RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 RAB30Q15771 203 aa18.68■□□□□ 0.58
SNHG28-203ENST00000621242 PRPF38AQ8NAV1 312 aaKnown RBP18.68■□□□□ 0.58
SNHG28-203ENST00000621242 UHRF1Q96T88 793 aaPredicted RBP18.68■□□□□ 0.58
SNHG28-203ENST00000621242 NKX2-4Q9H2Z4 354 aa18.68■□□□□ 0.58
SNHG28-203ENST00000621242 IL23AQ9NPF7 189 aa18.68■□□□□ 0.58
SNHG28-203ENST00000621242 CXXC1Q9P0U4 656 aaPredicted RBP18.68■□□□□ 0.58
SNHG28-203ENST00000621242 F5H6K3 240 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 KLRC3Q07444 240 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 ANKRD35Q8N283 1001 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 FGD4Q96M96 766 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.67■□□□□ 0.58
SNHG28-203ENST00000621242 RAVER2Q9HCJ3 691 aaKnown RBP18.67■□□□□ 0.58
SNHG28-203ENST00000621242 TRANK1O15050 2925 aa18.67■□□□□ 0.58
SNHG28-203ENST00000621242 ATP2A1O14983 1001 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 CTAGE5O15320 804 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 ZBED4O75132 1171 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 NDUFB10O96000 172 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 CD4P01730 458 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 BEX3Q00994 111 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 UBE3CQ15386 1083 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 ARMCX2Q7L311 632 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 STK11IPQ8N1F8 1099 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 SLC28A3Q9HAS3 691 aa18.66■□□□□ 0.58
SNHG28-203ENST00000621242 YBX2Q9Y2T7 364 aaKnown RBP18.66■□□□□ 0.58
SNHG28-203ENST00000621242 CTDP1Q9Y5B0 961 aaPredicted RBP18.66■□□□□ 0.58
SNHG28-203ENST00000621242 FGBP02675 491 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 RASA1P20936 1047 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.65■□□□□ 0.58
SNHG28-203ENST00000621242 IL27Q8NEV9 243 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 PUS7LQ9H0K6 701 aaKnown RBP18.65■□□□□ 0.58
SNHG28-203ENST00000621242 NYAP2Q9P242 653 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 UMODL1Q5DID0 1318 aa18.65■□□□□ 0.58
SNHG28-203ENST00000621242 ATP5JP18859 108 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 OTOP2Q7RTS6 562 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 HAUS7Q99871 368 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 MTIF3Q9H2K0 278 aaKnown RBP18.64■□□□□ 0.57
SNHG28-203ENST00000621242 SLC38A10Q9HBR0 1119 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 ARPP21Q9UBL0 812 aaPredicted RBP18.64■□□□□ 0.57
SNHG28-203ENST00000621242 CLIP2Q9UDT6 1046 aa18.64■□□□□ 0.57
SNHG28-203ENST00000621242 PRRC2BQ5JSZ5 2229 aaKnown RBP18.64■□□□□ 0.57
SNHG28-203ENST00000621242 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.63■□□□□ 0.57
SNHG28-203ENST00000621242 CXCL17Q6UXB2 119 aa18.63■□□□□ 0.57
SNHG28-203ENST00000621242 CHST13Q8NET6 341 aa18.63■□□□□ 0.57
SNHG28-203ENST00000621242 HIPK3Q9H422 1215 aa18.63■□□□□ 0.57
SNHG28-203ENST00000621242 MKNK2Q9HBH9 465 aa18.63■□□□□ 0.57
SNHG28-203ENST00000621242 FBXO40Q9UH90 709 aa18.63■□□□□ 0.57
SNHG28-203ENST00000621242 PLA2G5P39877 138 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 RABGGTBP53611 331 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 CCL23P55773 120 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 NKX3-2P78367 333 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 CNTN2Q02246 1040 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 NOL8Q76FK4 1167 aaKnown RBP18.62■□□□□ 0.57
SNHG28-203ENST00000621242 SLC43A3Q8NBI5 491 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 NECAB3Q96P71 396 aaPredicted RBP18.62■□□□□ 0.57
SNHG28-203ENST00000621242 ASTN1O14525 1302 aa18.62■□□□□ 0.57
SNHG28-203ENST00000621242 MINDY4BA8MYZ0 360 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 SBK1Q52WX2 424 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 ZSCAN25Q6NSZ9 544 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 SIRT2Q8IXJ6 389 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 RPAP2Q8IXW5 612 aaPredicted RBP18.61■□□□□ 0.57
SNHG28-203ENST00000621242 MICALL1Q8N3F8 863 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 TSPYL2Q9H2G4 693 aaPredicted RBP18.61■□□□□ 0.57
SNHG28-203ENST00000621242 HOMER2Q9NSB8 354 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 FEM1BQ9UK73 627 aa18.61■□□□□ 0.57
SNHG28-203ENST00000621242 GRIN2DO15399 1336 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 RAB11FIP3O75154 756 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 HMMRO75330 724 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 MYOGP15173 224 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 ITGA7Q13683 1181 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 FAM122AQ96E09 287 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 STRBPQ96SI9 672 aaKnown RBP18.6■□□□□ 0.57
SNHG28-203ENST00000621242 NOC4LQ9BVI4 516 aaKnown RBP18.6■□□□□ 0.57
SNHG28-203ENST00000621242 TRPV6Q9H1D0 765 aa18.6■□□□□ 0.57
SNHG28-203ENST00000621242 GNEQ9Y223 722 aaKnown RBP18.6■□□□□ 0.57
SNHG28-203ENST00000621242 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 GSG1L2A8MUP6 293 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 CABYRO75952 493 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 BMP1P13497 986 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 PTGS1P23219 599 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 OAZ1P54368 228 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 TFF2Q03403 129 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 PPP2R2DQ66LE6 453 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 FAM133AQ8N9E0 248 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 MKL1Q969V6 931 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 WNT8AQ9H1J5 351 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 SLC4A7Q9Y6M7 1214 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 LRRC37A2A6NM11 1700 aa18.59■□□□□ 0.57
SNHG28-203ENST00000621242 SOWAHBA6NEL2 793 aa18.58■□□□□ 0.56
SNHG28-203ENST00000621242 DYNC1LI2O43237 492 aaPredicted RBP18.58■□□□□ 0.56
SNHG28-203ENST00000621242 B4GALT4O60513 344 aa18.58■□□□□ 0.56
SNHG28-203ENST00000621242 PRDM1O75626 825 aa18.58■□□□□ 0.56
SNHG28-203ENST00000621242 FSCN1Q16658 493 aaKnown RBP18.58■□□□□ 0.56
SNHG28-203ENST00000621242 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms