RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 PPP1R11O60927 126 aaPredicted RBP22.91■■□□□ 1.26
MMP28-207ENST00000619655 ADCY7P51828 1080 aa22.91■■□□□ 1.26
MMP28-207ENST00000619655 KANK3Q6NY19 840 aa22.91■■□□□ 1.26
MMP28-207ENST00000619655 SIAH1Q8IUQ4 282 aa22.91■■□□□ 1.26
MMP28-207ENST00000619655 STAMQ92783 540 aa22.91■■□□□ 1.26
MMP28-207ENST00000619655 ARL6IP4Q66PJ3 421 aaKnown RBP22.9■■□□□ 1.26
MMP28-207ENST00000619655 FAM177A1Q8N128 213 aaPredicted RBP22.9■■□□□ 1.26
MMP28-207ENST00000619655 TBCKQ8TEA7 893 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 JDP2Q8WYK2 163 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 NUP88Q99567 741 aaPredicted RBP22.9■■□□□ 1.26
MMP28-207ENST00000619655 MAN1B1Q9UKM7 699 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 SCAF8Q9UPN6 1271 aaKnown RBP22.9■■□□□ 1.26
MMP28-207ENST00000619655 SLFN14P0C7P3 912 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 BMP6P22004 513 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 DTHD1Q6ZMT9 781 aa22.9■■□□□ 1.26
MMP28-207ENST00000619655 hCG_1984214I3L0E3 225 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 CCDC125Q86Z20 511 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 CDAN1Q8IWY9 1227 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 ELOA2Q8IYF1 753 aaPredicted RBP22.89■■□□□ 1.25
MMP28-207ENST00000619655 ZNF713Q8N859 430 aaPredicted RBP22.89■■□□□ 1.25
MMP28-207ENST00000619655 MKL1Q969V6 931 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 CCDC34Q96HJ3 373 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 NRBP1Q9UHY1 535 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
MMP28-207ENST00000619655 SHTN1A0MZ66 631 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 ZBTB5O15062 677 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 IKQ13123 557 aaPredicted RBP22.88■■□□□ 1.25
MMP28-207ENST00000619655 SPDYE2Q495Y8 402 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 SARM1Q6SZW1 724 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 NEK8Q86SG6 692 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 PAGE5Q96GU1 130 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 TMEM39BQ9GZU3 492 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 VPS33BQ9H267 617 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 PP2D1A8MPX8 630 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 F5H6K3 240 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 KLRC3Q07444 240 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 UBE2SQ16763 222 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 RASSF8Q8NHQ8 419 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 FAM151AQ8WW52 585 aa22.88■■□□□ 1.25
MMP28-207ENST00000619655 ESYT2A0FGR8 921 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 PTGS1P23219 599 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 LMOD1P29536 600 aaPredicted RBP22.87■■□□□ 1.25
MMP28-207ENST00000619655 LONP1P36776 959 aaKnown RBP22.87■■□□□ 1.25
MMP28-207ENST00000619655 AGBL3Q8NEM8 1001 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 SMTNL1A8MU46 457 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 TPM4P67936 248 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 NCAPHQ15003 741 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 NBPF9Q3BBW0 867 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 CIAPIN1Q6FI81 312 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 MIGA2Q7L4E1 593 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 SPICE1Q8N0Z3 855 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 DCAF4Q8WV16 495 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 CNTNAP1P78357 1384 aa22.87■■□□□ 1.25
MMP28-207ENST00000619655 NEMFO60524 1076 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 TXLNAP40222 546 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 SNAP25P60880 206 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 KARSQ15046 597 aaKnown RBP22.86■■□□□ 1.25
MMP28-207ENST00000619655 CCDC186Q7Z3E2 898 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 IQUBQ8NA54 791 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 HERC5Q9UII4 1024 aaKnown RBP22.86■■□□□ 1.25
MMP28-207ENST00000619655 MYO1BO43795 1136 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 TNNI2P48788 182 aa22.86■■□□□ 1.25
MMP28-207ENST00000619655 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.86■■□□□ 1.25
MMP28-207ENST00000619655 COL2A1P02458 1487 aaPredicted RBP22.85■■□□□ 1.25
MMP28-207ENST00000619655 NFKBIEO00221 500 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 SMC2O95347 1197 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 NDUFB10O96000 172 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 SARSP49591 514 aaKnown RBP22.85■■□□□ 1.25
MMP28-207ENST00000619655 QRICH1Q2TAL8 776 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 NT5DC1Q5TFE4 455 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 MYL5Q02045 173 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 E2F4Q16254 413 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 PLIN2Q99541 437 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 BLZF1Q9H2G9 400 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 KCNF1Q9H3M0 494 aa22.85■■□□□ 1.25
MMP28-207ENST00000619655 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.85■■□□□ 1.25
MMP28-207ENST00000619655 A0A1W2PRG0 241 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 PSDA5PKW4 1024 aaPredicted RBP22.84■■□□□ 1.25
MMP28-207ENST00000619655 WNT10BO00744 389 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 OR52Z1P0C646 297 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 ECE1P42892 770 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 CDC37Q16543 378 aaPredicted RBP22.84■■□□□ 1.25
MMP28-207ENST00000619655 FER1L6Q2WGJ9 1857 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 CUL5Q93034 780 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 MRFAP1L1Q96HT8 127 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 RIC8AQ9NPQ8 531 aa22.84■■□□□ 1.25
MMP28-207ENST00000619655 IKBKBO14920 756 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 MORC3Q14149 939 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 HSP90AA4PQ58FG1 418 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 POTEDQ86YR6 584 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 MYOZ2Q9NPC6 264 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 BRCA1P38398 1863 aaKnown RBP22.83■■□□□ 1.25
MMP28-207ENST00000619655 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 TMEM232C9JQI7 657 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 LAD1O00515 517 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 ATP1A3P13637 1013 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 UBA7P41226 1012 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 STAT6P42226 847 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 SH3RF1Q7Z6J0 888 aa22.83■■□□□ 1.25
MMP28-207ENST00000619655 PSTPIP2Q9H939 334 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms