RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 DPH5Q9H2P9 285 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 EIF4A3P38919 411 aaKnown RBP22.72■■□□□ 1.23
PCSK6-217ENST00000618548 MCAMP43121 646 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 BCAMP50895 628 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 RSRC2Q7L4I2 434 aaKnown RBP22.72■■□□□ 1.23
PCSK6-217ENST00000618548 ZNF579Q8NAF0 562 aaKnown RBP22.72■■□□□ 1.23
PCSK6-217ENST00000618548 NCAPGQ9BPX3 1015 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 ADD3Q9UEY8 706 aaKnown RBP22.72■■□□□ 1.23
PCSK6-217ENST00000618548 HECW2Q9P2P5 1572 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
PCSK6-217ENST00000618548 RRP36Q96EU6 259 aaKnown RBP22.71■■□□□ 1.23
PCSK6-217ENST00000618548 STMN4Q9H169 189 aaPredicted RBP22.71■■□□□ 1.23
PCSK6-217ENST00000618548 STIM2Q9P246 746 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 ZNF185O15231 689 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 CORO7P57737 925 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 NEDD9Q14511 834 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 CCDC6Q16204 474 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 ALS2CLQ60I27 953 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 RPAINQ86UA6 219 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 CCDC170Q8IYT3 715 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 NEDD4P46934 1319 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 APBA1Q02410 837 aa22.71■■□□□ 1.23
PCSK6-217ENST00000618548 FBXO2Q9UK22 296 aaPredicted RBP22.71■■□□□ 1.23
PCSK6-217ENST00000618548 FTCDO95954 541 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 LONP1P36776 959 aaKnown RBP22.7■■□□□ 1.22
PCSK6-217ENST00000618548 TECP42680 631 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 LACTBP83111 547 aaPredicted RBP22.7■■□□□ 1.22
PCSK6-217ENST00000618548 EMBQ6PCB8 327 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 LRRC31Q6UY01 552 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 TBCAO75347 108 aaKnown RBP22.7■■□□□ 1.22
PCSK6-217ENST00000618548 TFRCP02786 760 aaKnown RBP22.7■■□□□ 1.22
PCSK6-217ENST00000618548 TBC1D5Q92609 795 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 PXDNLA1KZ92 1463 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 ANTXR2P58335 489 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 UHMK1Q8TAS1 419 aaKnown RBP22.7■■□□□ 1.22
PCSK6-217ENST00000618548 FBF1Q8TES7 1133 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 LY9Q9HBG7 655 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 FBXO3Q9UK99 471 aa22.7■■□□□ 1.22
PCSK6-217ENST00000618548 ESYT3A0FGR9 886 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 POLR2FP61218 127 aaKnown RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 ZSCAN29Q8IWY8 852 aaPredicted RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 RETREG2Q8NC44 543 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 SNX29Q8TEQ0 813 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 STRBPQ96SI9 672 aaKnown RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 KRIT1O00522 736 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 PRCPP42785 496 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 CTSWP56202 376 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 NONOQ15233 471 aaKnown RBP eCLIP22.69■■□□□ 1.223e-6■■■■□ 21
PCSK6-217ENST00000618548 FOXR1Q6PIV2 292 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 N4BP2L2Q92802 583 aaPredicted RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 IL2RBP14784 551 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 MTMR3Q13615 1198 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 HERC4Q5GLZ8 1057 aaPredicted RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 ZBTB38Q8NAP3 1195 aaPredicted RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 P2RX5Q93086 422 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 LSM14BQ9BX40 385 aaKnown RBP22.69■■□□□ 1.22
PCSK6-217ENST00000618548 TFR2Q9UP52 801 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 USP31Q70CQ4 1352 aa22.69■■□□□ 1.22
PCSK6-217ENST00000618548 LRRIQ3A6PVS8 624 aaPredicted RBP22.68■■□□□ 1.22
PCSK6-217ENST00000618548 PCCAP05165 728 aaPredicted RBP22.68■■□□□ 1.22
PCSK6-217ENST00000618548 HOOK3Q86VS8 718 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 A2ML1A8K2U0 1454 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 GYPCP04921 128 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 ADAT2Q7Z6V5 191 aaKnown RBP22.68■■□□□ 1.22
PCSK6-217ENST00000618548 TCP11Q8WWU5 503 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 HPS5Q9UPZ3 1129 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 PCDHA13Q9Y5I0 950 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 KIF11P52732 1056 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 GRIPAP1Q4V328 841 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 ATG9AQ7Z3C6 839 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 ILDR1Q86SU0 546 aaPredicted RBP22.68■■□□□ 1.22
PCSK6-217ENST00000618548 SENP2Q9HC62 589 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 CETN3O15182 167 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 PEX19P40855 299 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 TFAP4Q01664 338 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 ACTN3Q08043 901 aaPredicted RBP22.68■■□□□ 1.22
PCSK6-217ENST00000618548 CETN1Q12798 172 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 LCORLQ8N3X6 602 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 MLXIPQ9HAP2 919 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 STK38LQ9Y2H1 464 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 USP32Q8NFA0 1604 aa22.68■■□□□ 1.22
PCSK6-217ENST00000618548 GCKP35557 465 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 IRAK1P51617 712 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 CCDC65Q8IXS2 484 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 SYCP3Q8IZU3 236 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 HPCAL4Q9UM19 191 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 GUCY2CP25092 1073 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 VWA3BQ502W6 1294 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 NAA35Q5VZE5 725 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 SH2D3CQ8N5H7 860 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 DDX17Q92841 729 aaKnown RBP22.67■■□□□ 1.22
PCSK6-217ENST00000618548 IQCDQ96DY2 449 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 ANKZF1Q9H8Y5 726 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 DEPDC5O75140 1603 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 LGALS16A8MUM7 142 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 KRT26Q7Z3Y9 468 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 MGARPQ8TDB4 240 aa22.67■■□□□ 1.22
PCSK6-217ENST00000618548 SMCR8Q8TEV9 937 aaPredicted RBP22.67■■□□□ 1.22
PCSK6-217ENST00000618548 SOS2Q07890 1332 aaPredicted RBP22.67■■□□□ 1.22
PCSK6-217ENST00000618548 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms