RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 BSDC1Q9NW68 430 aaPredicted RBP22.87■■□□□ 1.25
NEK3-208ENST00000618534 MAGEC2Q9UBF1 373 aaPredicted RBP22.87■■□□□ 1.25
NEK3-208ENST00000618534 GTF2E1P29083 439 aaPredicted RBP22.87■■□□□ 1.25
NEK3-208ENST00000618534 TTI2Q6NXR4 508 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 KIAA1328Q86T90 577 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 STAG2Q8N3U4 1231 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 LRRC15Q8TF66 581 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 TSPYL1Q9H0U9 437 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 AGPAT5Q9NUQ2 364 aa22.87■■□□□ 1.25
NEK3-208ENST00000618534 KIAA1551Q9HCM1 1747 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 LOC102724428A0A0B4J2F2 783 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 CCDC194A0A1B0GVG4 234 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 SIK1P57059 783 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 STIM1Q13586 685 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 MEA1Q16626 185 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 PAPD7Q5XG87 772 aaKnown RBP22.86■■□□□ 1.25
NEK3-208ENST00000618534 GIMAP8Q8ND71 665 aaPredicted RBP22.86■■□□□ 1.25
NEK3-208ENST00000618534 BBXQ8WY36 941 aaPredicted RBP22.86■■□□□ 1.25
NEK3-208ENST00000618534 JAKMIP2Q96AA8 810 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 EEF2KMTQ96G04 330 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 ACBD3Q9H3P7 528 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 KAT14Q9H8E8 782 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 RCCD1A6NED2 376 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 RHOBTB3O94955 611 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 KLK7P49862 253 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 DNM2P50570 870 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 SLC20A2Q08357 652 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 ACSBG1Q96GR2 724 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 TTYH3Q9C0H2 523 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 ATP8A2Q9NTI2 1148 aa22.86■■□□□ 1.25
NEK3-208ENST00000618534 ARPP21Q9UBL0 812 aaPredicted RBP22.86■■□□□ 1.25
NEK3-208ENST00000618534 M0R2N6 131 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 SRGNP10124 158 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 UBA7P41226 1012 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 KRT83P78385 493 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 DUSP9Q99956 384 aaKnown RBP22.85■■□□□ 1.25
NEK3-208ENST00000618534 LACRTQ9GZZ8 138 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 MED4Q9NPJ6 270 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 SH3GLB2Q9NR46 395 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 KBTBD4Q9NVX7 518 aa22.85■■□□□ 1.25
NEK3-208ENST00000618534 RASSF10A6NK89 507 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 PRDX5P30044 214 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 INF2Q27J81 1249 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 FBXO33Q7Z6M2 555 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 TUBGCP2Q9BSJ2 902 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 EXOC1Q9NV70 894 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 PCDHA6Q9UN73 950 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 PCDHA8Q9Y5H6 950 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 MYO1CO00159 1063 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 TNNT3P45378 269 aaPredicted RBP22.84■■□□□ 1.25
NEK3-208ENST00000618534 CSGALNACT2Q8N6G5 542 aa22.84■■□□□ 1.25
NEK3-208ENST00000618534 CELF1Q92879 486 aaKnown RBP22.84■■□□□ 1.25
NEK3-208ENST00000618534 KRT86O43790 486 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 TRIM21P19474 475 aaKnown RBP22.83■■□□□ 1.25
NEK3-208ENST00000618534 PNMA1Q8ND90 353 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 ZFP91Q96JP5 570 aaPredicted RBP22.83■■□□□ 1.25
NEK3-208ENST00000618534 FAM204AQ9H8W3 233 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 VIPAS39Q9H9C1 493 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 CYLC1P35663 651 aaPredicted RBP22.83■■□□□ 1.25
NEK3-208ENST00000618534 SF3B3Q15393 1217 aaKnown RBP22.83■■□□□ 1.25
NEK3-208ENST00000618534 SBK1Q52WX2 424 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 FOXR1Q6PIV2 292 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 ZNF662Q6ZS27 426 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 SRLQ86TD4 932 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 EHBP1Q8NDI1 1231 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 CCSER1Q9C0I3 900 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 NHEJ1Q9H9Q4 299 aaPredicted RBP22.83■■□□□ 1.25
NEK3-208ENST00000618534 IL17RBQ9NRM6 502 aa22.83■■□□□ 1.25
NEK3-208ENST00000618534 ZNF335Q9H4Z2 1342 aaPredicted RBP22.83■■□□□ 1.24
NEK3-208ENST00000618534 TRIM66O15016 1216 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 MYL1P05976 194 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 USP17L8P0C7I0 530 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 TFAP4Q01664 338 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 SLC35G1Q2M3R5 365 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 MCM9Q9NXL9 1143 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 TFCP2L1Q9NZI6 479 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 CASZ1Q86V15 1759 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 RNF40O75150 1001 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 ZMYND10O75800 440 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 IVLP07476 585 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 AARSP49588 968 aaKnown RBP eCLIP22.82■■□□□ 1.24
NEK3-208ENST00000618534 NOC3LQ8WTT2 800 aaKnown RBP22.82■■□□□ 1.24
NEK3-208ENST00000618534 HPCAL4Q9UM19 191 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 RRP15Q9Y3B9 282 aaKnown RBP22.82■■□□□ 1.24
NEK3-208ENST00000618534 DUSP10Q9Y6W6 482 aa22.82■■□□□ 1.24
NEK3-208ENST00000618534 COL14A1Q05707 1796 aaKnown RBP22.81■■□□□ 1.24
NEK3-208ENST00000618534 ZNF185O15231 689 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 RPS6KA5O75582 802 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 SYF2O95926 243 aaKnown RBP22.81■■□□□ 1.24
NEK3-208ENST00000618534 CKAP4Q07065 602 aaKnown RBP22.81■■□□□ 1.24
NEK3-208ENST00000618534 TBC1D8BQ0IIM8 1120 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 DHTKD1Q96HY7 919 aaPredicted RBP22.81■■□□□ 1.24
NEK3-208ENST00000618534 ZNHIT6Q9NWK9 470 aaKnown RBP22.81■■□□□ 1.24
NEK3-208ENST00000618534 JAG2Q9Y219 1238 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 ZNF652Q9Y2D9 606 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 MAP9Q49MG5 647 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 HEATR3Q7Z4Q2 680 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 C10orf67Q8IYJ2 551 aa22.81■■□□□ 1.24
NEK3-208ENST00000618534 CNOT6LQ96LI5 555 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms