RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 LCTP09848 1927 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 PGK1P00558 417 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 RARBP10826 455 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 ADCYAP1R1P41586 468 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 SNAP25P60880 206 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 SNX17Q15036 470 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 SLC39A5Q6ZMH5 540 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 ANKRD35Q8N283 1001 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 LRCH3Q96II8 777 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 TOMM22Q9NS69 142 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 FBXO40Q9UH90 709 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 PRR12Q9ULL5 1215 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 CNPY2Q9Y2B0 182 aa26.27■■□□□ 1.8
NEDD4L-237ENST00000617539 LRRC37A2A6NM11 1700 aa26.26■■□□□ 1.79
NEDD4L-237ENST00000617539 AKR1A1P14550 325 aa26.26■■□□□ 1.79
NEDD4L-237ENST00000617539 IKQ13123 557 aaPredicted RBP26.26■■□□□ 1.79
NEDD4L-237ENST00000617539 FERMT2Q96AC1 680 aa26.26■■□□□ 1.79
NEDD4L-237ENST00000617539 MTMR7Q9Y216 660 aa26.26■■□□□ 1.79
NEDD4L-237ENST00000617539 MDM2Q00987 491 aaPredicted RBP26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 CNTN2Q02246 1040 aa26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 TMEM47Q9BQJ4 181 aa26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 TCP11L1Q9NUJ3 509 aa26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 PHF24Q9UPV7 400 aa26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 ATP11BQ9Y2G3 1177 aa26.25■■□□□ 1.79
NEDD4L-237ENST00000617539 ADCY6O43306 1168 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 ADAMTS4O75173 837 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 AKNAD1Q5T1N1 836 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 TDHQ8IZJ6 230 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 DCAF4Q8WV16 495 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 UBE2OQ9C0C9 1292 aaKnown RBP26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 ACAD9Q9H845 621 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 A1CFQ9NQ94 594 aaKnown RBP26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 RNF146Q9NTX7 359 aa26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.24■■□□□ 1.79
NEDD4L-237ENST00000617539 NEDD4P46934 1319 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 SYNRGQ9UMZ2 1314 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 TRIM60Q495X7 471 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 TTBK2Q6IQ55 1244 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 CCDC174Q6PII3 467 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 CWC27Q6UX04 472 aaKnown RBP26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 FAM133AQ8N9E0 248 aa26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 ZHX1Q9UKY1 873 aaPredicted RBP26.23■■□□□ 1.79
NEDD4L-237ENST00000617539 ASTN1O14525 1302 aa26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 TOP1P11387 765 aaKnown RBP26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 PDE4AP27815 886 aa26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 CCDC96Q2M329 555 aa26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 RNF180Q86T96 592 aa26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 KATNBL1Q9H079 304 aa26.22■■□□□ 1.79
NEDD4L-237ENST00000617539 ALAS1P13196 640 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 SLC16A2P36021 539 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 MFAP1P55081 439 aaKnown RBP26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 ACVR2BQ13705 512 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 MUM1L1Q5H9M0 696 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 C1orf53Q5VUE5 145 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 BTNL9Q6UXG8 535 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 MFSD6Q6ZSS7 791 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 ARMCX2Q7L311 632 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 CCDC144CPQ8IYA2 1237 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 TRERF1Q96PN7 1200 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 DIAPH3Q9NSV4 1193 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 FAM184BQ9ULE4 1060 aa26.21■■□□□ 1.79
NEDD4L-237ENST00000617539 COL6A3P12111 3177 aa26.2■■□□□ 1.79
NEDD4L-237ENST00000617539 FRMPD2Q68DX3 1309 aaPredicted RBP26.2■■□□□ 1.79
NEDD4L-237ENST00000617539 A0A1W2PQ45 241 aaPredicted RBP26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 A0A1W2PQY0 241 aa26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 SOWAHBA6NEL2 793 aa26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 PCP11498 1178 aaKnown RBP26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 IRX5P78411 483 aaPredicted RBP26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 TKFCQ3LXA3 575 aa26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 LRIT3Q3SXY7 679 aa26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 IL25Q9H293 177 aa26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 RANBP17Q9H2T7 1088 aaKnown RBP26.2■■□□□ 1.78
NEDD4L-237ENST00000617539 MYADML2A6NDP7 307 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 POTEB2H3BUK9 544 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 PDHBP11177 359 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 CCSAPQ6IQ19 270 aaPredicted RBP26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 KLHDC9Q8NEP7 349 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 ABHD16BQ9H3Z7 469 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 PDLIM7Q9NR12 457 aa26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 DDX49Q9Y6V7 483 aaKnown RBP26.19■■□□□ 1.78
NEDD4L-237ENST00000617539 DUSP11O75319 330 aaKnown RBP26.18■■□□□ 1.78
NEDD4L-237ENST00000617539 CCDC144BQ3MJ40 725 aa26.18■■□□□ 1.78
NEDD4L-237ENST00000617539 SH3RF1Q7Z6J0 888 aa26.18■■□□□ 1.78
NEDD4L-237ENST00000617539 GPCPD1Q9NPB8 672 aa26.18■■□□□ 1.78
NEDD4L-237ENST00000617539 CCPG1Q9ULG6 757 aa26.18■■□□□ 1.78
NEDD4L-237ENST00000617539 ZNF213O14771 459 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 ICAM1P05362 532 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 GSPT1P15170 499 aaKnown RBP26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 ACLYP53396 1101 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 IRX6P78412 446 aaPredicted RBP26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 SYDE2Q5VT97 1194 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 TTC14Q96N46 770 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 ZKSCAN3Q9BRR0 538 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 RNF41Q9H4P4 317 aaPredicted RBP26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 CYP39A1Q9NYL5 469 aa26.17■■□□□ 1.78
NEDD4L-237ENST00000617539 TRIM43BA6NCK2 446 aa26.16■■□□□ 1.78
NEDD4L-237ENST00000617539 HIP1O00291 1037 aa26.16■■□□□ 1.78
NEDD4L-237ENST00000617539 SNHG28P0DPA3 235 aa26.16■■□□□ 1.78
NEDD4L-237ENST00000617539 TLE2Q04725 743 aa26.16■■□□□ 1.78
NEDD4L-237ENST00000617539 TRIM43Q96BQ3 446 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms