RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 ATP2C1P98194 919 aaPredicted RBP23.54■■□□□ 1.36
CNTNAP3B-212ENST00000617422 FAM177A1Q8N128 213 aaPredicted RBP23.54■■□□□ 1.36
CNTNAP3B-212ENST00000617422 SDF4Q9BRK5 362 aa23.54■■□□□ 1.36
CNTNAP3B-212ENST00000617422 KCNH3Q9ULD8 1083 aa23.54■■□□□ 1.36
CNTNAP3B-212ENST00000617422 IL17AQ16552 155 aa23.53■■□□□ 1.36
CNTNAP3B-212ENST00000617422 ANO6Q4KMQ2 910 aa23.53■■□□□ 1.36
CNTNAP3B-212ENST00000617422 SPICE1Q8N0Z3 855 aa23.53■■□□□ 1.36
CNTNAP3B-212ENST00000617422 C4orf32Q8N8J7 132 aa23.53■■□□□ 1.36
CNTNAP3B-212ENST00000617422 CCDC194A0A1B0GVG4 234 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 CCDC84Q86UT8 332 aaPredicted RBP23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 ZNF579Q8NAF0 562 aaKnown RBP23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 CCDC12Q8WUD4 166 aaPredicted RBP23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 GMCL1Q96IK5 515 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 C6orf50Q9HD87 102 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 TMEM260Q9NX78 707 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 HACL1Q9UJ83 578 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 ESYT2A0FGR8 921 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 ZBTB5O15062 677 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 CAP2P40123 477 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 MMP14P50281 582 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 LONRF3Q496Y0 759 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 GLIS2Q9BZE0 524 aaPredicted RBP23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 PDCL3Q9H2J4 239 aa23.52■■□□□ 1.36
CNTNAP3B-212ENST00000617422 PHF20L1A8MW92 1017 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SNAP25P60880 206 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 KIF4BQ2VIQ3 1234 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SASS6Q6UVJ0 657 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 BIN2Q9UBW5 565 aaPredicted RBP23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 EPSTI1Q96J88 318 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 DNAJC25Q9H1X3 360 aa23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 R3HCC1Q9Y3T6 440 aaKnown RBP23.51■■□□□ 1.35
CNTNAP3B-212ENST00000617422 ATAD5Q96QE3 1844 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 A0A087X0B3 334 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 hCG_1984214I3L0E3 225 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 PTMAP06454 111 aaKnown RBP23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 LMNB1P20700 586 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 GNA11P29992 359 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 QRICH1Q2TAL8 776 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 JAKMIP3Q5VZ66 844 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 ZNF713Q8N859 430 aaPredicted RBP23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TRPM4Q8TD43 1214 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TIGD1Q96MW7 591 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TNNI2P48788 182 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TMEM60Q9H2L4 133 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TMX2Q9Y320 296 aa23.5■■□□□ 1.35
CNTNAP3B-212ENST00000617422 BMP15O95972 392 aa23.49■■□□□ 1.35
CNTNAP3B-212ENST00000617422 C11orf57Q6ZUT1 292 aaPredicted RBP23.49■■□□□ 1.35
CNTNAP3B-212ENST00000617422 REXO1Q8N1G1 1221 aaKnown RBP23.49■■□□□ 1.35
CNTNAP3B-212ENST00000617422 KIAA1468Q9P260 1216 aa23.49■■□□□ 1.35
CNTNAP3B-212ENST00000617422 VWA3AA6NCI4 1184 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TMEM232C9JQI7 657 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 FOXN1O15353 648 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 EDIL3O43854 480 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 BMP3P12645 472 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 FERMT2Q96AC1 680 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SYT17Q9BSW7 474 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 DEFB129Q9H1M3 183 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 ADCY7P51828 1080 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 CDC37Q16543 378 aaPredicted RBP23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 LUZP1Q86V48 1076 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 FAM200AQ8TCP9 573 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 CBX8Q9HC52 389 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 GPRC5DQ9NZD1 345 aa23.48■■□□□ 1.35
CNTNAP3B-212ENST00000617422 POLR2DO15514 142 aaKnown RBP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 AP5Z1O43299 807 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TAL1P17542 331 aaPredicted RBP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TNFAIP1Q13829 316 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 UBE2SQ16763 222 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 KRBA2Q6ZNG9 492 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 KRT25Q7Z3Z0 450 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 PDILTQ8N807 584 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SYMPKQ92797 1274 aaKnown RBP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 ARHGEF10LQ9HCE6 1279 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SMCHD1A6NHR9 2005 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 YBX3P16989 372 aaKnown RBP eCLIP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 NONOQ15233 471 aaKnown RBP eCLIP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 NBPF12Q5TAG4 269 aaPredicted RBP23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 RIC8AQ9NPQ8 531 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SYNPO2Q9UMS6 1093 aa23.47■■□□□ 1.35
CNTNAP3B-212ENST00000617422 EPS15P42566 896 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 PNOCQ13519 176 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 ZYXQ15942 572 aaKnown RBP23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 PRAMEF18Q5VWM3 479 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 TBCKQ8TEA7 893 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 MAP7D2Q96T17 732 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 FAM13BQ9NYF5 915 aa23.46■■□□□ 1.35
CNTNAP3B-212ENST00000617422 HIRAP54198 1017 aaPredicted RBP23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 MDM2Q00987 491 aaPredicted RBP23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 PPP1R18Q6NYC8 613 aa23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 BTNL9Q6UXG8 535 aa23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 GPC2Q8N158 579 aa23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 USP25Q9UHP3 1055 aa23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 SERTAD1Q9UHV2 236 aa23.45■■□□□ 1.35
CNTNAP3B-212ENST00000617422 CLK2P49760 499 aaKnown RBP23.45■■□□□ 1.34
CNTNAP3B-212ENST00000617422 FAM83BQ5T0W9 1011 aa23.45■■□□□ 1.34
CNTNAP3B-212ENST00000617422 SYDE2Q5VT97 1194 aa23.45■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ANGEL2Q5VTE6 544 aaKnown RBP23.45■■□□□ 1.34
CNTNAP3B-212ENST00000617422 H7C1D1 291 aa23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 ACTN4O43707 911 aaKnown RBP23.44■■□□□ 1.34
CNTNAP3B-212ENST00000617422 STX1AQ16623 288 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms