RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PFDN1O60925 122 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 NR1D1P20393 614 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 TFAP4Q01664 338 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 CASC4Q6P4E1 433 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 ACRBPQ8NEB7 543 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 CNOT6LQ96LI5 555 aaKnown RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 SOWAHDA6NJG2 315 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 GIPC1O14908 333 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 TTLL12Q14166 644 aaPredicted RBP11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 PFDN4Q9NQP4 134 aa11.69□□□□□ -0.54
CLTCL1-209ENST00000617103 CHUKO15111 745 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 DKC1O60832 514 aaKnown RBP eCLIP11.68□□□□□ -0.542e-6■■■■□ 22.2
CLTCL1-209ENST00000617103 OR52Z1P0C646 297 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 SP4Q02446 784 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 STRN3Q13033 797 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 CMTR1Q8N1G2 835 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 DAAM1Q9Y4D1 1078 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 CYP21A2P08686 494 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 DIXDC1Q155Q3 683 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 CC2D1AQ6P1N0 951 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 EMBQ6PCB8 327 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 GPBP1Q86WP2 473 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 IFNL3Q8IZI9 196 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 WHAMMQ8TF30 809 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 ATF2P15336 505 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 NAA35Q5VZE5 725 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 DHTKD1Q96HY7 919 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 SLC39A2Q9NP94 309 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 EIF3CLB5ME19 914 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 SCG2P13521 617 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 TECP42680 631 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 EIF6P56537 245 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 SLC8A3P57103 927 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 MIER3Q7Z3K6 550 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 EIF3CQ99613 913 aaKnown RBP11.68□□□□□ -0.54
CLTCL1-209ENST00000617103 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 PGRMC1O00264 195 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 C2orf54Q08AI8 447 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 FAM26FQ5R3K3 315 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 GALNT17Q6IS24 598 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 MAGOHBQ96A72 148 aaKnown RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 ZSCAN10Q96SZ4 725 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 PCDH11XQ9BZA7 1347 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 PCDH11YQ9BZA8 1340 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 TNKSO95271 1327 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 NDUFA10O95299 355 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SLFN14P0C7P3 912 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 RESTQ13127 1097 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 TAF11Q15544 211 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 KMT5BQ4FZB7 885 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 RDH13Q8NBN7 331 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SPZ1Q9BXG8 430 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 FTOQ9C0B1 505 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 TSPYL2Q9H2G4 693 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SH2D4AQ9H788 454 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 THEGQ9P2T0 379 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 MAN1B1Q9UKM7 699 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 HMGB1P1B2RPK0 211 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 CD19P15391 556 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 GYS2P54840 703 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 ARHGAP4P98171 946 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 KIF23Q02241 960 aaPredicted RBP11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 ADAM9Q13443 819 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 MAEAQ7L5Y9 396 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SCYL3Q8IZE3 742 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 FBXO41Q8TF61 875 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 IWS1Q96ST2 819 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SLC52A2Q9HAB3 445 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 ATP8A2Q9NTI2 1148 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 RAB20Q9NX57 234 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SCOCQ9UIL1 159 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 ATP8A1Q9Y2Q0 1164 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 KDRP35968 1356 aa11.67□□□□□ -0.54
CLTCL1-209ENST00000617103 SLC1A4P43007 532 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 DAPK3O43293 454 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 SKIP12755 728 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ZBED6P86452 979 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 DHX9Q08211 1270 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 DBN1Q16643 649 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ARHGEF18Q6ZSZ5 1173 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ANKRD35Q8N283 1001 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 EEF2KMTQ96G04 330 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 N4BP1O75113 896 aaKnown RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 PDE6AP16499 860 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 MAN1A1P33908 653 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 SLMAPQ14BN4 828 aa11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 ZKSCAN8Q15776 578 aaPredicted RBP11.66□□□□□ -0.54
CLTCL1-209ENST00000617103 FAM47AQ5JRC9 791 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms