RNA–Protein interactions for RNA: ENST00000616702.1

CCL3L3-202, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 2

Gene CCL3L3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-202ENST00000616702 CHST13Q8NET6 341 aa16.03■□□□□ 0.16
CCL3L3-202ENST00000616702 DCAF4Q8WV16 495 aa16.03■□□□□ 0.16
CCL3L3-202ENST00000616702 AGBL1Q96MI9 1066 aa16.03■□□□□ 0.16
CCL3L3-202ENST00000616702 SENP6Q9GZR1 1112 aaPredicted RBP16.03■□□□□ 0.16
CCL3L3-202ENST00000616702 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
CCL3L3-202ENST00000616702 NEDD4P46934 1319 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 FRMPD2Q68DX3 1309 aaPredicted RBP16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 DNM1LO00429 736 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 SLC34A2O95436 690 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 COL6A1P12109 1028 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 DSCC1Q9BVC3 393 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 GPCPD1Q9NPB8 672 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 CTNNA3Q9UI47 895 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 PRR12Q9ULL5 1215 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 ZMYND8Q9ULU4 1186 aaPredicted RBP16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 ZNF236Q9UL36 1845 aa16.02■□□□□ 0.16
CCL3L3-202ENST00000616702 PLA2G6O60733 806 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 ALAS1P13196 640 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 SLC16A2P36021 539 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 ATN1P54259 1190 aaPredicted RBP16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 IQCA1Q86XH1 822 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 RASEFQ8IZ41 740 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 TTC14Q96N46 770 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 TRERF1Q96PN7 1200 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 NRBP1Q9UHY1 535 aa16.01■□□□□ 0.15
CCL3L3-202ENST00000616702 ZNF536O15090 1300 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 KBTBD13C9JR72 458 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 KDM4AO75164 1064 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 RARBP10826 455 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 TAL1P17542 331 aaPredicted RBP16■□□□□ 0.15
CCL3L3-202ENST00000616702 SYN1P17600 705 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 LRRC26Q2I0M4 334 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 MSL3Q8N5Y2 521 aaKnown RBP16■□□□□ 0.15
CCL3L3-202ENST00000616702 RUFY2Q8WXA3 655 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 XPNPEP3Q9NQH7 507 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 RNF146Q9NTX7 359 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 PARP14Q460N5 1801 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 MYH4Q9Y623 1939 aa16■□□□□ 0.15
CCL3L3-202ENST00000616702 COL11A1P12107 1806 aaPredicted RBP15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 B4E1Z4 1266 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 ZNF865P0CJ78 1059 aaPredicted RBP15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 PDHBP11177 359 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 AKR1A1P14550 325 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 TKFCQ3LXA3 575 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 IL25Q9H293 177 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 ZHX1Q9UKY1 873 aaPredicted RBP15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 CCPG1Q9ULG6 757 aa15.99■□□□□ 0.15
CCL3L3-202ENST00000616702 SYNGAP1Q96PV0 1343 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 SNAI1O95863 264 aaPredicted RBP15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 CCDC178Q5BJE1 867 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 SYDE2Q5VT97 1194 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 KRT23Q9C075 422 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
CCL3L3-202ENST00000616702 PGK1P00558 417 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 ICAM1P05362 532 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 CHMLP26374 656 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 NT5C2P49902 561 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 NUBP1P53384 320 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 CNTN2Q02246 1040 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 ZNF543Q08ER8 600 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 LRRC41Q15345 812 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 BTNL9Q6UXG8 535 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 RNF180Q86T96 592 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 RANBP17Q9H2T7 1088 aaKnown RBP15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 A1CFQ9NQ94 594 aaKnown RBP15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 ZSWIM5Q9P217 1185 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 FAM184BQ9ULE4 1060 aa15.97■□□□□ 0.15
CCL3L3-202ENST00000616702 RAD50Q92878 1312 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 GOLGA8HP0CJ92 632 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 ADCYAP1R1P41586 468 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 ACVR2BQ13705 512 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 MUM1L1Q5H9M0 696 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 NSMFQ6X4W1 530 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 ARMCX2Q7L311 632 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 IFNLR1Q8IU57 520 aaPredicted RBP15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 CCDC144CPQ8IYA2 1237 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 FERMT2Q96AC1 680 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 LENG1Q96BZ8 264 aaPredicted RBP15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 UBAC1Q9BSL1 405 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 ABHD16BQ9H3Z7 469 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
CCL3L3-202ENST00000616702 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
CCL3L3-202ENST00000616702 TRDNQ13061 729 aa15.95■□□□□ 0.14
CCL3L3-202ENST00000616702 FAM133AQ8N9E0 248 aa15.95■□□□□ 0.14
CCL3L3-202ENST00000616702 PNMA1Q8ND90 353 aa15.95■□□□□ 0.14
CCL3L3-202ENST00000616702 FGD4Q96M96 766 aa15.95■□□□□ 0.14
CCL3L3-202ENST00000616702 ATP11BQ9Y2G3 1177 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms