RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 FAM86C2PA6NEL3 165 aa21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 TRANK1O15050 2925 aa21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 TLL1O43897 1013 aa21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 CCDC144BQ3MJ40 725 aa21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 ALYREFQ86V81 257 aaKnown RBP21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 DCP1AQ9NPI6 582 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC3-209ENST00000616395 CTAGE5O15320 804 aa21.09■□□□□ 0.97
TRAPPC3-209ENST00000616395 GPR37L1O60883 481 aa21.09■□□□□ 0.97
TRAPPC3-209ENST00000616395 EEF2P13639 858 aaKnown RBP21.09■□□□□ 0.97
TRAPPC3-209ENST00000616395 RIPK3Q9Y572 518 aa21.09■□□□□ 0.97
TRAPPC3-209ENST00000616395 GTPBP6O43824 516 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 POU3F3P20264 500 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 FAM83BQ5T0W9 1011 aa21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 SNRNP48Q6IEG0 339 aaKnown RBP21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 SLC43A3Q8NBI5 491 aa21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 TEX13BQ9BXU2 312 aa21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 COG5Q9UP83 839 aa21.08■□□□□ 0.97
TRAPPC3-209ENST00000616395 LRRC37A2A6NM11 1700 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 ZBBXA8MT70 800 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 RAD21O60216 631 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 ATP2A2P16615 1042 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 BEX3Q00994 111 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 KRT40Q6A162 431 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 CXCL17Q6UXB2 119 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 NOC4LQ9BVI4 516 aaKnown RBP21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 WNT8AQ9H1J5 351 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 ABHD16BQ9H3Z7 469 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 CERS4Q9HA82 394 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 ZBTB40Q9NUA8 1239 aa21.07■□□□□ 0.96
TRAPPC3-209ENST00000616395 SMIM22K7EJ46 135 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 PDE6AP16499 860 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 SLC4A3P48751 1232 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 SLC9C2Q5TAH2 1124 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 LCORLQ8N3X6 602 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 VWCEQ96DN2 955 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 FGD4Q96M96 766 aa21.06■□□□□ 0.96
TRAPPC3-209ENST00000616395 EPOPA6NHQ4 379 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 CA3P07451 260 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 RPUSD2Q8IZ73 545 aaKnown RBP21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 TRPV6Q9H1D0 765 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 GOPCQ9HD26 462 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 EXOC6BQ9Y2D4 811 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 GRIN2DO15399 1336 aa21.05■□□□□ 0.96
TRAPPC3-209ENST00000616395 NKX3-2P78367 333 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 HDAC1Q13547 482 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 ITGA7Q13683 1181 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 TMEM67Q5HYA8 995 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 ARMCX2Q7L311 632 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 HLA-CQ95604 372 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 NUP88Q99567 741 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 KANSL2Q9H9L4 492 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 NOP58Q9Y2X3 529 aaKnown RBP21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 ASTN1O14525 1302 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 CYP2D7A0A087X1C5 515 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 CDK8P49336 464 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 SIRT2Q8IXJ6 389 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 SCLYQ96I15 445 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 SLF1Q9BQI6 1058 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 KATNBL1Q9H079 304 aa21.04■□□□□ 0.96
TRAPPC3-209ENST00000616395 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 PRKAB2O43741 272 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 B4GALT4O60513 344 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 TTLL4Q14679 1199 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 NOL8Q76FK4 1167 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 CPXCR1Q8N123 301 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 ARMT1Q9H993 441 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 CD320Q9NPF0 282 aa21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 PRRC2BQ5JSZ5 2229 aaKnown RBP21.03■□□□□ 0.96
TRAPPC3-209ENST00000616395 TCRBV5S4A2TA0A5A2 114 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 PI4K2BG5E9Z4 385 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 CABYRO75952 493 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 TNFAIP2Q03169 654 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 TTF1Q15361 905 aaPredicted RBP21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 ANKRD35Q8N283 1001 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 ARNTL2Q8WYA1 636 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 AGBL1Q96MI9 1066 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 PIEZO1Q92508 2521 aa21.02■□□□□ 0.95
TRAPPC3-209ENST00000616395 MYH8P13535 1937 aa21.01■□□□□ 0.95
TRAPPC3-209ENST00000616395 HMMRO75330 724 aa21.01■□□□□ 0.95
TRAPPC3-209ENST00000616395 PTGS1P23219 599 aa21.01■□□□□ 0.95
TRAPPC3-209ENST00000616395 C12orf60Q5U649 245 aa21.01■□□□□ 0.95
TRAPPC3-209ENST00000616395 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC3-209ENST00000616395 ATP2A1O14983 1001 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 ARHGEF15O94989 841 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 PSMC6P62333 389 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 FSCN1Q16658 493 aaKnown RBP21■□□□□ 0.95
TRAPPC3-209ENST00000616395 C16orf86Q6ZW13 317 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21■□□□□ 0.95
TRAPPC3-209ENST00000616395 TLK2Q86UE8 772 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 AACSQ86V21 672 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 RAVER2Q9HCJ3 691 aaKnown RBP21■□□□□ 0.95
TRAPPC3-209ENST00000616395 PCDHB15Q9Y5E8 787 aa21■□□□□ 0.95
TRAPPC3-209ENST00000616395 MUC6Q6W4X9 2439 aa20.99■□□□□ 0.95
TRAPPC3-209ENST00000616395 TAP1Q03518 808 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms