RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 NNTQ13423 1086 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 WDR59Q6PJI9 974 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 FBXL16Q8N461 479 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 CSGALNACT2Q8N6G5 542 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 NACAP1Q9BZK3 213 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 TRMT112Q9UI30 125 aaKnown RBP14.68□□□□□ -0.06
MSH6-214ENST00000616033 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.68□□□□□ -0.06
MSH6-214ENST00000616033 CCDC196A0A1B0GTZ2 297 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 E7EVH7 732 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 EIF3HO15372 352 aaKnown RBP eCLIP14.68□□□□□ -0.066e-7■■□□□ 13.3
MSH6-214ENST00000616033 MAP3K12Q12852 859 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 TDRD12Q587J7 1177 aaKnown RBP14.68□□□□□ -0.06
MSH6-214ENST00000616033 ODF2Q5BJF6 829 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 MTRQ99707 1265 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 TANGO6Q9C0B7 1094 aa14.68□□□□□ -0.06
MSH6-214ENST00000616033 AATFQ9NY61 560 aaKnown RBP eCLIP14.68□□□□□ -0.06
MSH6-214ENST00000616033 C8orf74Q6P047 294 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 FAM184BQ9ULE4 1060 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 EIF4E1BA6NMX2 242 aaKnown RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 GUCY2DQ02846 1103 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 SPAG1Q07617 926 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 TRADDQ15628 312 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.061e-10■■□□□ 11.7
MSH6-214ENST00000616033 IFIH1Q9BYX4 1025 aaKnown RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 KRT23Q9C075 422 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 JAG2Q9Y219 1238 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 KDM3BQ7LBC6 1761 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 N4BP2Q86UW6 1770 aaPredicted RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 ANKRD18BA2A2Z9 1011 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 TUBBP07437 444 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 EVX2Q03828 476 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 TTMPQ5BVD1 217 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 FAM47AQ5JRC9 791 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 CFAP58Q5T655 872 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 IFIT1BQ5T764 474 aaKnown RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 SGMS1Q86VZ5 419 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 KLHL7Q8IXQ5 586 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 TTLL11Q8NHH1 800 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 TUBGCP2Q9BSJ2 902 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 LTN1O94822 1766 aa14.67□□□□□ -0.06
MSH6-214ENST00000616033 SOS2Q07890 1332 aaPredicted RBP14.67□□□□□ -0.06
MSH6-214ENST00000616033 GSG1L2A8MUP6 293 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 BCAMP50895 628 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 N4BP2L2Q92802 583 aaPredicted RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 ZIM3Q96PE6 472 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 EPB41L5Q9HCM4 733 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 PSMD14O00487 310 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 RPSAP08865 295 aaKnown RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 FAM153BP0C7A2 387 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 LIFRP42702 1097 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 PAFAH1B1P43034 410 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.068e-6■■■■■ 52.4
MSH6-214ENST00000616033 FAM153CQ494X1 144 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 RNPC3Q96LT9 517 aaKnown RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 NOC4LQ9BVI4 516 aaKnown RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 LIMA1Q9UHB6 759 aaKnown RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 FAM153AQ9UHL3 310 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 CIAO1O76071 339 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 CARSP49589 748 aaKnown RBP14.66□□□□□ -0.06
MSH6-214ENST00000616033 TUBB4BP68371 445 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 HLFQ16534 295 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 SPATA4Q8NEY3 305 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 OR2W6PQ8NHA6 318 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 NLRC4Q9NPP4 1024 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 RWDD2AQ9UIY3 292 aa14.66□□□□□ -0.06
MSH6-214ENST00000616033 OPA1O60313 960 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 TACC1O75410 805 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 CYP7A1P22680 504 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 USP8P40818 1118 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 RASSF7Q02833 373 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 SEMA3FQ13275 785 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 ZNF579Q8NAF0 562 aaKnown RBP14.65□□□□□ -0.06
MSH6-214ENST00000616033 VIPAS39Q9H9C1 493 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 MYH13Q9UKX3 1938 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 NUTM2BA6NNL0 878 aaPredicted RBP14.65□□□□□ -0.06
MSH6-214ENST00000616033 NUTM2EB1AL46 878 aaPredicted RBP14.65□□□□□ -0.06
MSH6-214ENST00000616033 UBA7P41226 1012 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 RASGRF1Q13972 1273 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 KIF6Q6ZMV9 814 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 DNAAF5Q86Y56 855 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 SPATA5Q8NB90 893 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 SPATA20Q8TB22 786 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 KANSL2Q9H9L4 492 aa14.65□□□□□ -0.06
MSH6-214ENST00000616033 ZC3H4Q9UPT8 1303 aaKnown RBP14.65□□□□□ -0.06
MSH6-214ENST00000616033 FTCDO95954 541 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 CATIPQ7Z7H3 387 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 IRF2BP1Q8IU81 584 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 CCDC114Q96M63 670 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 RBM12Q9NTZ6 932 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 SPATA31A3Q5VYP0 1347 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 USO1O60763 962 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 CDR1P51861 262 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 SARNPP82979 210 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 HDLBPQ00341 1268 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 SF3B2Q13435 895 aaKnown RBP14.64□□□□□ -0.07
MSH6-214ENST00000616033 IQCEQ6IPM2 695 aa14.64□□□□□ -0.07
MSH6-214ENST00000616033 RRAGAQ7L523 313 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 332.2 ms