RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 UIMC1Q96RL1 719 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 RIC8AQ9NPQ8 531 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 EVI5O60447 810 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 PHBP35232 272 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 LONP1P36776 959 aaKnown RBP20.69■□□□□ 0.9
SPAST-203ENST00000615843 KIF23Q02241 960 aaPredicted RBP20.69■□□□□ 0.9
SPAST-203ENST00000615843 PALM2Q8IXS6 379 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 IFNL3Q8IZI9 196 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 AFAP1L2Q8N4X5 818 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 Q9H521 79 aa20.69■□□□□ 0.9
SPAST-203ENST00000615843 TECP42680 631 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 PASKQ96RG2 1323 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 SMCO2A6NFE2 343 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 IFNB1P01574 187 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 HIBADHP31937 336 aaKnown RBP20.68■□□□□ 0.9
SPAST-203ENST00000615843 SNX16P57768 344 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 TACC3Q9Y6A5 838 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 SP4Q02446 784 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 FAM47AQ5JRC9 791 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 TPTE2Q6XPS3 522 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 RNF14Q9UBS8 474 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 KDM3AQ9Y4C1 1321 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 IL9RQ01113 521 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 FAM133BQ5BKY9 247 aaKnown RBP20.68■□□□□ 0.9
SPAST-203ENST00000615843 MAEAQ7L5Y9 396 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 GPBP1Q86WP2 473 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 PLA2G4DQ86XP0 818 aa20.68■□□□□ 0.9
SPAST-203ENST00000615843 DDX27Q96GQ7 796 aaKnown RBP20.68■□□□□ 0.9
SPAST-203ENST00000615843 ZSCAN10Q96SZ4 725 aaPredicted RBP20.68■□□□□ 0.9
SPAST-203ENST00000615843 CNOT10Q9H9A5 744 aaKnown RBP20.68■□□□□ 0.9
SPAST-203ENST00000615843 TFAP4Q01664 338 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 ZNF589Q86UQ0 364 aaPredicted RBP20.67■□□□□ 0.9
SPAST-203ENST00000615843 NDUFA10O95299 355 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 CXCR5P32302 372 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 TAF11Q15544 211 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 CCT6BQ92526 530 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 ZNF622Q969S3 477 aaKnown RBP eCLIP20.67■□□□□ 0.9
SPAST-203ENST00000615843 PPP1R9AQ9ULJ8 1098 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 PLXNC1O60486 1568 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 ZWINTO95229 277 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 CLEC17AQ6ZS10 378 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 KSR1Q8IVT5 923 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 GRAMD1CQ8IYS0 662 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 ATP2A3Q93084 1043 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 BIN2Q9UBW5 565 aaPredicted RBP20.67■□□□□ 0.9
SPAST-203ENST00000615843 PFDN1O60925 122 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 CRCPO75575 148 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 OR52Z1P0C646 297 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 FOXP1Q9H334 677 aaPredicted RBP20.67■□□□□ 0.9
SPAST-203ENST00000615843 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 ATP8A1Q9Y2Q0 1164 aa20.67■□□□□ 0.9
SPAST-203ENST00000615843 TNKSO95271 1327 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 MED23Q9ULK4 1368 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 DIXDC1Q155Q3 683 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 ZKSCAN8Q15776 578 aaPredicted RBP20.66■□□□□ 0.9
SPAST-203ENST00000615843 ACSBG1Q96GR2 724 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 ATF2P15336 505 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 KDM5CP41229 1560 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 CAPN12Q6ZSI9 719 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 RDH13Q8NBN7 331 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 FAF1Q9UNN5 650 aaPredicted RBP20.66■□□□□ 0.9
SPAST-203ENST00000615843 CHUKO15111 745 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 SCG2P13521 617 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 MRPS9P82933 396 aaKnown RBP20.66■□□□□ 0.9
SPAST-203ENST00000615843 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
SPAST-203ENST00000615843 STK10O94804 968 aaKnown RBP20.65■□□□□ 0.9
SPAST-203ENST00000615843 CASC4Q6P4E1 433 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 WHAMMQ8TF30 809 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 EMBQ6PCB8 327 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 CADPS2Q86UW7 1296 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 VCX3AQ9NNX9 186 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 ZCCHC17Q9NP64 241 aaKnown RBP20.65■□□□□ 0.9
SPAST-203ENST00000615843 DAAM1Q9Y4D1 1078 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 A1BGP04217 495 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.65■□□□□ 0.9
SPAST-203ENST00000615843 MROH5Q6ZUA9 1318 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 MOCS3O95396 460 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 DHX9Q08211 1270 aaKnown RBP20.65■□□□□ 0.9
SPAST-203ENST00000615843 CCDC144BQ3MJ40 725 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 PANK4Q9NVE7 773 aa20.65■□□□□ 0.9
SPAST-203ENST00000615843 HMGB1P1B2RPK0 211 aaPredicted RBP20.64■□□□□ 0.9
SPAST-203ENST00000615843 PGRMC1O00264 195 aaKnown RBP20.64■□□□□ 0.9
SPAST-203ENST00000615843 SLFN14P0C7P3 912 aa20.64■□□□□ 0.9
SPAST-203ENST00000615843 NOVA2Q9UNW9 492 aaKnown RBP20.64■□□□□ 0.9
SPAST-203ENST00000615843 PDE6AP16499 860 aa20.64■□□□□ 0.89
SPAST-203ENST00000615843 BBOF1Q8ND07 529 aa20.64■□□□□ 0.89
SPAST-203ENST00000615843 PPP4R1Q8TF05 950 aa20.64■□□□□ 0.89
SPAST-203ENST00000615843 DHTKD1Q96HY7 919 aaPredicted RBP20.64■□□□□ 0.89
SPAST-203ENST00000615843 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.89
SPAST-203ENST00000615843 ADAM9Q13443 819 aa20.64■□□□□ 0.89
SPAST-203ENST00000615843 USP27XA6NNY8 438 aa20.64■□□□□ 0.89
SPAST-203ENST00000615843 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.89
SPAST-203ENST00000615843 BZW2Q9Y6E2 419 aaKnown RBP20.64■□□□□ 0.89
SPAST-203ENST00000615843 CYP2J2P51589 502 aa20.63■□□□□ 0.89
SPAST-203ENST00000615843 SLC7A5Q01650 507 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms