RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
MUC1-227ENST00000615517 BAZ2AQ9UIF9 1905 aaKnown RBP8.42□□□□□ -1.06
MUC1-227ENST00000615517 LCHNA4D1U4 455 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 C19orf67A6NJJ6 358 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 GFRA3O60609 400 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 PTGS1P23219 599 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 PLCD1P51178 756 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 PTPN5P54829 565 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 ZP2Q05996 745 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 ITGA7Q13683 1181 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 ACVR2BQ13705 512 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 HERC6Q8IVU3 1022 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 SPICE1Q8N0Z3 855 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 MSL3Q8N5Y2 521 aaKnown RBP8.42□□□□□ -1.06
MUC1-227ENST00000615517 REPS2Q8NFH8 660 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 PHOSPHO2Q8TCD6 241 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 FGD4Q96M96 766 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 MFSD14AQ96MC6 490 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 NEUROD6Q96NK8 337 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 SLC9A7Q96T83 725 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 FAM86C1Q9NVL1 165 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 ZNF536O15090 1300 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 SCN10AQ9Y5Y9 1956 aa8.42□□□□□ -1.06
MUC1-227ENST00000615517 LCTP09848 1927 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 DNAJC25-GNG10A0A024R161 153 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.41□□□□□ -1.06
MUC1-227ENST00000615517 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
MUC1-227ENST00000615517 PFKMP08237 780 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 STAT3P40763 770 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 PSMC6P62333 389 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 TMCO2Q7Z6W1 182 aaPredicted RBP8.41□□□□□ -1.06
MUC1-227ENST00000615517 CLEC10AQ8IUN9 316 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 NEK9Q8TD19 979 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 KATNBL1Q9H079 304 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 FBXO28Q9NVF7 368 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.41□□□□□ -1.06
MUC1-227ENST00000615517 ZNF214Q9UL59 606 aaPredicted RBP8.41□□□□□ -1.06
MUC1-227ENST00000615517 AKAP2Q9Y2D5 859 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 MICAL3Q7RTP6 2002 aa8.41□□□□□ -1.06
MUC1-227ENST00000615517 COL4A6Q14031 1691 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 DNAH14Q0VDD8 3507 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 PTPRCP08575 1304 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 H3BQ06 376 aaPredicted RBP8.4□□□□□ -1.06
MUC1-227ENST00000615517 RBAK-RBAKDNI3L0D1 243 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 VWA5AO00534 786 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 UBTFL1P0CB47 393 aaPredicted RBP8.4□□□□□ -1.06
MUC1-227ENST00000615517 CYP2C9P11712 490 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 IRS1P35568 1242 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 GABPAQ06546 454 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 SPC25Q9HBM1 224 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 PIH1D3Q9NQM4 214 aaKnown RBP8.4□□□□□ -1.06
MUC1-227ENST00000615517 RIPK3Q9Y572 518 aa8.4□□□□□ -1.06
MUC1-227ENST00000615517 ZNF292O60281 2723 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 BAHCC1Q9P281 2608 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 NCOR2Q9Y618 2525 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 KIF28PB7ZC32 967 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 MPHOSPH10O00566 681 aaKnown RBP8.39□□□□□ -1.07
MUC1-227ENST00000615517 USP5P45974 858 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 ZNF467Q7Z7K2 595 aaPredicted RBP8.39□□□□□ -1.07
MUC1-227ENST00000615517 TTC6Q86TZ1 520 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 MIGA1Q8NAN2 632 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 ALDH8A1Q9H2A2 487 aaPredicted RBP8.39□□□□□ -1.07
MUC1-227ENST00000615517 ABHD16BQ9H3Z7 469 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 VCPKMTQ9H867 229 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 TRMT13Q9NUP7 481 aaKnown RBP8.39□□□□□ -1.07
MUC1-227ENST00000615517 MUTYHQ9UIF7 546 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 MTUS1Q9ULD2 1270 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 GNEQ9Y223 722 aaKnown RBP8.39□□□□□ -1.07
MUC1-227ENST00000615517 TMX2Q9Y320 296 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 MYH4Q9Y623 1939 aa8.39□□□□□ -1.07
MUC1-227ENST00000615517 DMXL1Q9Y485 3027 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 WDR46O15213 610 aaKnown RBP8.38□□□□□ -1.07
MUC1-227ENST00000615517 CABYRO75952 493 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 KRT37O76014 449 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 UQCRFS1P1P0C7P4 283 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 ACTN1P12814 892 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 CYP7A1P22680 504 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 ERVK-21P61565 698 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 PUS10Q3MIT2 529 aaKnown RBP8.38□□□□□ -1.07
MUC1-227ENST00000615517 HERC4Q5GLZ8 1057 aaPredicted RBP8.38□□□□□ -1.07
MUC1-227ENST00000615517 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 ARMCX2Q7L311 632 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 BMP8AQ7Z5Y6 402 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 DDX11Q96FC9 970 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 PRKAG3Q9UGI9 489 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 PPP1R9AQ9ULJ8 1098 aa8.38□□□□□ -1.07
MUC1-227ENST00000615517 GREB1LQ9C091 1923 aaPredicted RBP8.38□□□□□ -1.07
MUC1-227ENST00000615517 EP300Q09472 2414 aaPredicted RBP8.38□□□□□ -1.07
MUC1-227ENST00000615517 LINC01553A4QN01 128 aa8.37□□□□□ -1.07
MUC1-227ENST00000615517 RGS20O76081 388 aa8.37□□□□□ -1.07
MUC1-227ENST00000615517 ZAP70P43403 619 aa8.37□□□□□ -1.07
MUC1-227ENST00000615517 TNFAIP2Q03169 654 aa8.37□□□□□ -1.07
MUC1-227ENST00000615517 FSCN1Q16658 493 aaKnown RBP8.37□□□□□ -1.07
MUC1-227ENST00000615517 TMEM179Q6ZVK1 233 aa8.37□□□□□ -1.07
MUC1-227ENST00000615517 ASCL5Q7RTU5 278 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms