RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 UTRNP46939 3433 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 CLRN2A0PK11 232 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 NPM3O75607 178 aaKnown RBP21.72■■□□□ 1.07
MMP28-204ENST00000615136 SARSP49591 514 aaKnown RBP21.72■■□□□ 1.07
MMP28-204ENST00000615136 DHX8Q14562 1220 aaKnown RBP21.72■■□□□ 1.07
MMP28-204ENST00000615136 TMEM260Q9NX78 707 aa21.72■■□□□ 1.07
MMP28-204ENST00000615136 MYO1BO43795 1136 aa21.71■■□□□ 1.07
MMP28-204ENST00000615136 VIL1P09327 827 aaKnown RBP21.71■■□□□ 1.07
MMP28-204ENST00000615136 TNNT1P13805 278 aa21.71■■□□□ 1.07
MMP28-204ENST00000615136 AFMP43652 599 aa21.71■■□□□ 1.07
MMP28-204ENST00000615136 NT5DC1Q5TFE4 455 aa21.71■■□□□ 1.07
MMP28-204ENST00000615136 CCDC150Q8NCX0 1101 aa21.71■■□□□ 1.07
MMP28-204ENST00000615136 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
MMP28-204ENST00000615136 HOOK1Q9UJC3 728 aaKnown RBP21.71■■□□□ 1.07
MMP28-204ENST00000615136 ATF5Q9Y2D1 282 aaPredicted RBP21.71■■□□□ 1.07
MMP28-204ENST00000615136 FANCCQ00597 558 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 TPD52L1Q16890 204 aaPredicted RBP21.7■■□□□ 1.06
MMP28-204ENST00000615136 CCDC96Q2M329 555 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 STAMQ92783 540 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 C6orf50Q9HD87 102 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 SPDYE2BA6NHP3 402 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 TCP10L2B9ZVM9 353 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 CTIFO43310 598 aaKnown RBP21.7■■□□□ 1.06
MMP28-204ENST00000615136 SPDYE6P0CI01 402 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 LMOD1P29536 600 aaPredicted RBP21.7■■□□□ 1.06
MMP28-204ENST00000615136 E2F4Q16254 413 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 JAKMIP3Q5VZ66 844 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 SH3RF1Q7Z6J0 888 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 PAGE5Q96GU1 130 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 ATRNL1Q5VV63 1379 aa21.7■■□□□ 1.06
MMP28-204ENST00000615136 USP17L10C9JJH3 530 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 RAD21O60216 631 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 ENTPD3O75355 529 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 SLFN14P0C7P3 912 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 NYAP1Q6ZVC0 841 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 ZNF710Q8N1W2 664 aa21.69■■□□□ 1.06
MMP28-204ENST00000615136 CCDC12Q8WUD4 166 aaPredicted RBP21.69■■□□□ 1.06
MMP28-204ENST00000615136 PP2D1A8MPX8 630 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 SOGA3Q5TF21 947 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 ARL6IP4Q66PJ3 421 aaKnown RBP21.68■■□□□ 1.06
MMP28-204ENST00000615136 TMC6Q7Z403 805 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 SPATA20Q8TB22 786 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 SMARCE1Q969G3 411 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 CSRNP1Q96S65 589 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 PAXBP1Q9Y5B6 917 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 USP27XA6NNY8 438 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 ATP1A3P13637 1013 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 GNA11P29992 359 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 MORC3Q14149 939 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 GRIPAP1Q4V328 841 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 CDAN1Q8IWY9 1227 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 FAM177A1Q8N128 213 aaPredicted RBP21.68■■□□□ 1.06
MMP28-204ENST00000615136 TSC1Q92574 1164 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 TRIM34Q9BYJ4 488 aa21.68■■□□□ 1.06
MMP28-204ENST00000615136 EDIL3O43854 480 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 KCNJ6P48051 423 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 NONOQ15233 471 aaKnown RBP eCLIP21.67■■□□□ 1.06
MMP28-204ENST00000615136 LETM2Q2VYF4 491 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 ARMCX5Q6P1M9 558 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 KRT25Q7Z3Z0 450 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 MKL1Q969V6 931 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 MTRQ99707 1265 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 KANSL2Q9H9L4 492 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 NYAP2Q9P242 653 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 ESYT2A0FGR8 921 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 ABCB5Q2M3G0 1257 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 KANK3Q6NY19 840 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 CCAR2Q8N163 923 aaKnown RBP21.67■■□□□ 1.06
MMP28-204ENST00000615136 TBCKQ8TEA7 893 aa21.67■■□□□ 1.06
MMP28-204ENST00000615136 ZNF70Q9UC06 446 aaPredicted RBP21.67■■□□□ 1.06
MMP28-204ENST00000615136 PNMA6FA0A0J9YX94 578 aa21.66■■□□□ 1.06
MMP28-204ENST00000615136 CBFA2T2O43439 604 aa21.66■■□□□ 1.06
MMP28-204ENST00000615136 ICA1Q05084 483 aa21.66■■□□□ 1.06
MMP28-204ENST00000615136 FMR1Q06787 632 aaKnown RBP eCLIP21.66■■□□□ 1.06
MMP28-204ENST00000615136 GPATCH4Q5T3I0 446 aaKnown RBP21.66■■□□□ 1.06
MMP28-204ENST00000615136 PDXDC2PQ6P474 469 aa21.66■■□□□ 1.06
MMP28-204ENST00000615136 REXO1Q8N1G1 1221 aaKnown RBP21.66■■□□□ 1.06
MMP28-204ENST00000615136 MED15Q96RN5 788 aa21.66■■□□□ 1.06
MMP28-204ENST00000615136 CNTNAP1P78357 1384 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 CCNT1O60563 726 aaKnown RBP21.65■■□□□ 1.06
MMP28-204ENST00000615136 GH2P01242 217 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 KARSQ15046 597 aaKnown RBP21.65■■□□□ 1.06
MMP28-204ENST00000615136 CCDC125Q86Z20 511 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 TRIML1Q8N9V2 468 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 MTMR8Q96EF0 704 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 NUP88Q99567 741 aaPredicted RBP21.65■■□□□ 1.06
MMP28-204ENST00000615136 PIM2Q9P1W9 311 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 SHTN1A0MZ66 631 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 PRKCSHP14314 528 aaPredicted RBP21.65■■□□□ 1.06
MMP28-204ENST00000615136 SFPQP23246 707 aaKnown RBP eCLIP21.65■■□□□ 1.06
MMP28-204ENST00000615136 LONP1P36776 959 aaKnown RBP21.65■■□□□ 1.06
MMP28-204ENST00000615136 DPYDQ12882 1025 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 DLGAP5Q15398 846 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 UBE2SQ16763 222 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 CEP135Q66GS9 1140 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 SLFN13Q68D06 897 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 TMEM179Q6ZVK1 233 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 ZNRF3Q9ULT6 936 aa21.65■■□□□ 1.06
MMP28-204ENST00000615136 ADCY7P51828 1080 aa21.64■■□□□ 1.05
MMP28-204ENST00000615136 CXCL9Q07325 125 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms