RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CCNHP51946 323 aaPredicted RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 NTRK3Q16288 839 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 ATL3Q6DD88 541 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 WASF1Q92558 559 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 IQCGQ9H095 443 aaKnown RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
VPS11-206ENST00000614944 SLC12A7Q9Y666 1083 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 MYH6P13533 1939 aa9.95□□□□□ -0.82
VPS11-206ENST00000614944 CYP2D6P10635 497 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 GJB2P29033 226 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 ZNF444Q8N0Y2 327 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 NKX2-3Q8TAU0 364 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 FAM217BQ9NTX9 383 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 ZDHHC9Q9Y397 364 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 MYH4Q9Y623 1939 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 GOLGA8BA8MQT2 603 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 ACTN2P35609 894 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 SCNN1DP51172 638 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 CCDC15Q0P6D6 951 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 TROAPQ12815 778 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 CRYMQ14894 314 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 ZNF654Q8IZM8 581 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 TMEM87AQ8NBN3 555 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 BAG1Q99933 345 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 MYOZ2Q9NPC6 264 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 DOCK1Q14185 1865 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 STX6O43752 255 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 MYO1BO43795 1136 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 ZSCAN22P10073 491 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 SHMT1P34896 483 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 GNAQP50148 359 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 METAP2P50579 478 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS11-206ENST00000614944 TNFAIP1Q13829 316 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 CATIPQ7Z7H3 387 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 CTCFLQ8NI51 663 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 MICAL1Q8TDZ2 1067 aa9.94□□□□□ -0.82
VPS11-206ENST00000614944 PRMT6Q96LA8 375 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
VPS11-206ENST00000614944 CYP2D7A0A087X1C5 515 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 TNNI2P48788 182 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 IFIT1BQ5T764 474 aaKnown RBP9.93□□□□□ -0.82
VPS11-206ENST00000614944 HOOK2Q96ED9 719 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
VPS11-206ENST00000614944 MKNK2Q9HBH9 465 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 IL17RBQ9NRM6 502 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 KIF2AO00139 706 aaPredicted RBP9.93□□□□□ -0.82
VPS11-206ENST00000614944 RAD17O75943 681 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 SNHG28P0DPA3 235 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 SYT1P21579 422 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 GRM4Q14833 912 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 SH3BP5LQ7L8J4 393 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 FANCBQ8NB91 859 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 MRFAP1L1Q96HT8 127 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 TCEANC2Q96MN5 208 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 SLX1AQ9BQ83 275 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 MTMR6Q9Y217 621 aa9.93□□□□□ -0.82
VPS11-206ENST00000614944 PTPDC1A2A3K4 754 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TSPY2A6NKD2 308 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TOP1P11387 765 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 PECAM1P16284 738 aaPredicted RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 PRPHP41219 470 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TFAP4Q01664 338 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 RASSF7Q02833 373 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 FUT2Q10981 343 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 NOL8Q76FK4 1167 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 RBM12BQ8IXT5 1001 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 N4BP2L2Q92802 583 aaPredicted RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 SRRTQ9BXP5 876 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 NYAP2Q9P242 653 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TSPY3P0CV98 308 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TSPY8P0CW00 308 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 KIF5BP33176 963 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 NF2P35240 595 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 RTN1Q16799 776 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 NECAB1Q8N987 351 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS11-206ENST00000614944 A1CFQ9NQ94 594 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 PSD3Q9NYI0 1048 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 FHOD1Q9Y613 1164 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 SYCE3A1L190 88 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 GOLGA8AA7E2F4 631 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 F8W031 263 aaPredicted RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 PRPF3O43395 683 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 GRIN3BO60391 1043 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 CAPN15O75808 1086 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 PLA2G4AP47712 749 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 TADA2BQ86TJ2 420 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 APOBEC3FQ8IUX4 373 aaKnown RBP9.92□□□□□ -0.82
VPS11-206ENST00000614944 PHC3Q8NDX5 983 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 LRRC2Q9BYS8 371 aa9.92□□□□□ -0.82
VPS11-206ENST00000614944 ZNF541Q9H0D2 1346 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 hCG_1984214I3L0E3 225 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 WNT10BO00744 389 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 F13A1P00488 732 aa9.91□□□□□ -0.82
VPS11-206ENST00000614944 FDPSP14324 419 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms