RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 SLC1A4P43007 532 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 MRPL12P52815 198 aaKnown RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 ACLYP53396 1101 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 NKX3-2P78367 333 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 KIAA1755Q5JYT7 1200 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 PSRC1Q6PGN9 363 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 CLEC10AQ8IUN9 316 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 IFNL3Q8IZI9 196 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 OSBP2Q969R2 916 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 CEP95Q96GE4 821 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 BCL11AQ9H165 835 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 UPF3AQ9H1J1 476 aaKnown RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 FBXO28Q9NVF7 368 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 ZHX1Q9UKY1 873 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 Q9Y3F1 56 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 LTBP2Q14767 1821 aa8.58□□□□□ -1.04
TARDBP-216ENST00000614494 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
TARDBP-216ENST00000614494 SYNRGQ9UMZ2 1314 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 TSPY2A6NKD2 308 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 PGK2P07205 417 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 GJA9P57773 515 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 TLE2Q04725 743 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 PPARAQ07869 468 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 IKQ13123 557 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 PPIGQ13427 754 aaKnown RBP eCLIP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 ACVR2BQ13705 512 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 SLFN13Q68D06 897 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 TMEM199Q8N511 208 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 STAG1Q8WVM7 1258 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 EVI5LQ96CN4 794 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 RNPC3Q96LT9 517 aaKnown RBP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 TMEM39AQ9NV64 488 aa8.57□□□□□ -1.04
TARDBP-216ENST00000614494 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 ADD3Q9UEY8 706 aaKnown RBP8.57□□□□□ -1.04
TARDBP-216ENST00000614494 RAD50Q92878 1312 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 LAMA3Q16787 3333 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 ORC4O43929 436 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 PGK1P00558 417 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 TIMP1P01033 207 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 C6orf222P0C671 652 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 BRDTQ58F21 947 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 MFSD5Q6N075 450 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 ARMCX2Q7L311 632 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 KLHDC9Q8NEP7 349 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 DCAF4Q8WV16 495 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 BADQ92934 168 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 FERMT2Q96AC1 680 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 RNF41Q9H4P4 317 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 EPB41L4AQ9HCS5 686 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 VTA1Q9NP79 307 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 HELLSQ9NRZ9 838 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 ANAPC4Q9UJX5 808 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 ISY1Q9ULR0 285 aaKnown RBP8.56□□□□□ -1.04
TARDBP-216ENST00000614494 STX8Q9UNK0 236 aa8.56□□□□□ -1.04
TARDBP-216ENST00000614494 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 CUL9Q8IWT3 2517 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 TMEM232C9JQI7 657 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 SMARCA5O60264 1052 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-216ENST00000614494 PFKMP08237 780 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 TFAP4Q01664 338 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 SHHQ15465 462 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 ALX1Q15699 326 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 KCNA10Q16322 511 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 GNASQ5JWF2 1037 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
TARDBP-216ENST00000614494 Q7L0L9 218 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 CPXCR1Q8N123 301 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 PI4K2BQ8TCG2 481 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 TTC14Q96N46 770 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 AP5M1Q9H0R1 490 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 RAVER2Q9HCJ3 691 aaKnown RBP8.55□□□□□ -1.04
TARDBP-216ENST00000614494 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
TARDBP-216ENST00000614494 COL11A1P12107 1806 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 SZT2Q5T011 3432 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 TRIM43BA6NCK2 446 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 M0R2C6 588 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 ARVCFO00192 962 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 HIP1O00291 1037 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 KPNA6O60684 536 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 SNAI1O95863 264 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 ICAM1P05362 532 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 ASGR1P07306 291 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 SUPT20HL2P0C7V6 817 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 FOSL2P15408 326 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 NOVP48745 357 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 CPT1AP50416 773 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 TNFAIP2Q03169 654 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms