RNA–Protein interactions for RNA: ENST00000614000.4

SYNRG-220, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 4,234 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-220ENST00000614000 ZNF213O14771 459 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 IFIT1P09914 478 aaKnown RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 CETN2P41208 172 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 KRT83P78385 493 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 PPFIA1Q13136 1202 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 TNNI3KQ59H18 835 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 STRIP1Q5VSL9 837 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 TRMT44Q8IYL2 757 aaKnown RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 CACNA2D3Q8IZS8 1091 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 SMARCC2Q8TAQ2 1214 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 MGARPQ8TDB4 240 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 STAG1Q8WVM7 1258 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ABTB1Q969K4 478 aaPredicted RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ALG1Q9BT22 464 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 CAPS2Q9BXY5 557 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 SLC12A7Q9Y666 1083 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 FPGT-TNNI3KV9GXZ4 949 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ROBO3Q96MS0 1386 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 A0A0G2JLW4 131 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 KIF3CO14782 793 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ZNF131P52739 623 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ACTN3Q08043 901 aaPredicted RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 GOLGA8FQ08AF8 430 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 GOLGA8DPQ0D2H9 430 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 PSMD6Q15008 389 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 CCDC50Q8IVM0 306 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 KLHL7Q8IXQ5 586 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 RNF25Q96BH1 459 aaPredicted RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 TRIM4Q9C037 500 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 DDX41Q9UJV9 622 aaKnown RBP6.18□□□□□ -1.42
SYNRG-220ENST00000614000 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
SYNRG-220ENST00000614000 A0A087WUV0 522 aaPredicted RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 ARHGAP6O43182 974 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 RANBP6O60518 1105 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 ATP5JP18859 108 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 SSRP1Q08945 709 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 APOBRQ0VD83 1088 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 DBN1Q16643 649 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 KRT71Q3SY84 523 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 FKBP1CQ5VVH2 108 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 MMS22LQ6ZRQ5 1243 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 DZIP1Q86YF9 867 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 LRRC8AQ8IWT6 810 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 GPC2Q8N158 579 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 GBP7Q8N8V2 638 aaPredicted RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TTC16Q8NEE8 873 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 RHPN1Q8TCX5 695 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TSG101Q99816 390 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TRIM6Q9C030 488 aaPredicted RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 NAPBQ9H115 298 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 VCXQ9H320 206 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 CLSTN2Q9H4D0 955 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 NSFL1CQ9UNZ2 370 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 RAD50Q92878 1312 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 RLFQ13129 1914 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TMEM110-MUSTN1A8MSY1 372 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 EIF3CLB5ME19 914 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 HIP1RO75146 1068 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 BRD1O95696 1058 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 HMGB1P09429 215 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 RXRAP19793 462 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 METAP2P50579 478 aaKnown RBP eCLIP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 NLRP5P59047 1200 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 SNCBQ16143 134 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 DACT2Q5SW24 774 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 METTL16Q86W50 562 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 EFCAB13Q8IY85 973 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 LEO1Q8WVC0 666 aaPredicted RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 EVI5LQ96CN4 794 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 PLIN2Q99541 437 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 EIF3CQ99613 913 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 YIPF3Q9GZM5 350 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 IQCGQ9H095 443 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 GNL3LQ9NVN8 582 aaKnown RBP6.17□□□□□ -1.42
SYNRG-220ENST00000614000 PTPDC1A2A3K4 754 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 YDJCA8MPS7 323 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 PRC1O43663 620 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 UQCRFS1P1P0C7P4 283 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 GJC1P36383 396 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 COG7P83436 770 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 MAP3K10Q02779 954 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 BRD3Q15059 726 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 CTAGE1Q96RT6 745 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 ADAM21Q9UKJ8 722 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 NFE2L3Q9Y4A8 694 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 SSC5DA1L4H1 1573 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 CCDC194A0A1B0GVG4 234 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 CHMLP26374 656 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 KRT9P35527 623 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TUBB4BP68371 445 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 ARID5BQ14865 1188 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 PTPROQ16827 1216 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 MUM1Q2TAK8 710 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 LRRC24Q50LG9 513 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 TMEM67Q5HYA8 995 aa6.17□□□□□ -1.42
SYNRG-220ENST00000614000 CDC37L1Q7L3B6 337 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms