RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 WDR19Q8NEZ3 1342 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 GPR75-ASB3A0A0A6YYF3 556 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 GSCP56915 257 aaPredicted RBP24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 VSNL1P62760 191 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 DLGAP5Q15398 846 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 KIF4BQ2VIQ3 1234 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 FAM163AQ96GL9 167 aaPredicted RBP24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 ZDHHC15Q96MV8 337 aa24.68■■□□□ 1.54
POLR2J3-220ENST00000613744 CACNB3P54284 484 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 PTPAQ15257 358 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 MAP9Q49MG5 647 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 NT5DC1Q5TFE4 455 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 RPAINQ86UA6 219 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 ZBTB9Q96C00 473 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 STRBPQ96SI9 672 aaKnown RBP24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 DESI2Q9BSY9 194 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 TDRD3Q9H7E2 651 aaKnown RBP24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 PCDHA5Q9Y5H7 936 aa24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 ZC3H4Q9UPT8 1303 aaKnown RBP24.67■■□□□ 1.54
POLR2J3-220ENST00000613744 A0A1B0GTH6 734 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 KIF28PB7ZC32 967 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 H7C1D1 291 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 FECHP22830 423 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 USP8P40818 1118 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 NBPF9Q3BBW0 867 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 ZSWIM4Q9H7M6 989 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 BAG3O95817 575 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 ZNF280AP59817 542 aaPredicted RBP24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 HDLBPQ00341 1268 aaKnown RBP24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 OTUD7BQ6GQQ9 843 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 TRPM4Q8TD43 1214 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 SDR42E1Q8WUS8 393 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 NAPGQ99747 312 aaPredicted RBP24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 USP40Q9NVE5 1235 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 SCAF8Q9UPN6 1271 aaKnown RBP24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 NFE2L3Q9Y4A8 694 aa24.66■■□□□ 1.54
POLR2J3-220ENST00000613744 LOC102724159A0A0B4J2E5 919 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 CLRN2A0PK11 232 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 FOXP2O15409 715 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 SHOX2O60902 331 aaPredicted RBP24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 PWP2Q15269 919 aaKnown RBP24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 MRIQ9BWK5 157 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 SPDYE2BA6NHP3 402 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 PRPF6O94906 941 aaKnown RBP24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 SPDYE6P0CI01 402 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 CDC42EP5Q6NZY7 148 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 SLC4A4Q9Y6R1 1079 aa24.65■■□□□ 1.54
POLR2J3-220ENST00000613744 ASTN2O75129 1339 aaPredicted RBP24.64■■□□□ 1.54
POLR2J3-220ENST00000613744 WNT10BO00744 389 aa24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 RNF40O75150 1001 aa24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 RHBDL3P58872 404 aa24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 MDM2Q00987 491 aaPredicted RBP24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 PDE4BQ07343 736 aa24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 ZNF569Q5MCW4 686 aa24.64■■□□□ 1.53
POLR2J3-220ENST00000613744 CPLX1O14810 134 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 ERCC5P28715 1186 aaPredicted RBP24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 MARCKSP29966 332 aaPredicted RBP24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 PPFIBP1Q86W92 1011 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 LZTFL1Q9NQ48 299 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 KCNH3Q9ULD8 1083 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 RAD9BQ6WBX8 426 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 FOXP4Q8IVH2 680 aaPredicted RBP24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 TEX11Q8IYF3 940 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 TGFBRAP1Q8WUH2 860 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 MAN1B1Q9UKM7 699 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 HPS5Q9UPZ3 1129 aa24.63■■□□□ 1.53
POLR2J3-220ENST00000613744 SOWAHDA6NJG2 315 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 LRRIQ3A6PVS8 624 aaPredicted RBP24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 BMP6P22004 513 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 PPP4CP60510 307 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 PICALMQ13492 652 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 SLC4A8Q2Y0W8 1093 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 MAP3K14Q99558 947 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 IRX2Q9BZI1 471 aaPredicted RBP24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 POTECB2RU33 542 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 FGAP02671 866 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 SARSP49591 514 aaKnown RBP24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 PSEN1P49768 467 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 HIRAP54198 1017 aaPredicted RBP24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 CCDC148Q8NFR7 591 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 L3MBTL3Q96JM7 780 aaPredicted RBP24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 SUGCTQ9HAC7 445 aa24.62■■□□□ 1.53
POLR2J3-220ENST00000613744 GOLGA8BA8MQT2 603 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 SYF2O95926 243 aaKnown RBP24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 RHOXF2BP0C7M4 288 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 MORC3Q14149 939 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 MTF1Q14872 753 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 LONRF3Q496Y0 759 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 TMED8Q6PL24 325 aaPredicted RBP24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 RHOXF2Q9BQY4 288 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 HACL1Q9UJ83 578 aa24.61■■□□□ 1.53
POLR2J3-220ENST00000613744 KLF18A0A0U1RQI7 1052 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 HAND2P61296 217 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 NFIAQ12857 509 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 CNGA4Q8IV77 575 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 MAPKAPK5Q8IW41 473 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 CRNKL1Q9BZJ0 848 aaKnown RBP24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 VEZTQ9HBM0 779 aa24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 TARSL2A2RTX5 802 aaKnown RBP24.6■■□□□ 1.53
POLR2J3-220ENST00000613744 PATL2C9JE40 543 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms