RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 CYP2D7A0A087X1C5 515 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 ICA1Q05084 483 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 A6NNZ2 444 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
GGA3-220ENST00000613421 EEF1GP26641 437 aaKnown RBP15.23■□□□□ 0.03
GGA3-220ENST00000613421 TUBB8Q3ZCM7 444 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 ASPRV1Q53RT3 343 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 C6orf163Q5TEZ5 329 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 LIN9Q5TKA1 542 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 DAAM2Q86T65 1068 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 FBXO11Q86XK2 927 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 TBC1D10CQ8IV04 446 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 KIAA0825Q8IV33 1275 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 TUBGCP2Q9BSJ2 902 aa15.23■□□□□ 0.03
GGA3-220ENST00000613421 ALDH8A1Q9H2A2 487 aaPredicted RBP15.23■□□□□ 0.03
GGA3-220ENST00000613421 CPS1P31327 1500 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 NDUFAB1O14561 156 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 VSTM4Q8IW00 320 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 C10orf67Q8IYJ2 551 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
GGA3-220ENST00000613421 PTPRUQ92729 1446 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 RBL2Q08999 1139 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 PPFIA1Q13136 1202 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 PTPN21Q16825 1174 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 ZNF658Q5TYW1 1059 aaPredicted RBP15.22■□□□□ 0.03
GGA3-220ENST00000613421 SLFN13Q68D06 897 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 WDR19Q8NEZ3 1342 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 STAMBPO95630 424 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 STAG1Q8WVM7 1258 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 DHTKD1Q96HY7 919 aaPredicted RBP15.22■□□□□ 0.03
GGA3-220ENST00000613421 STAT1P42224 750 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.22■□□□□ 0.03
GGA3-220ENST00000613421 GJB4Q9NTQ9 266 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
GGA3-220ENST00000613421 PCDHA1Q9Y5I3 950 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
GGA3-220ENST00000613421 NRXN1Q9ULB1 1477 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 ATP2A2P16615 1042 aaKnown RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 CLUL1Q15846 466 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 GPATCH4Q5T3I0 446 aaKnown RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 SARM1Q6SZW1 724 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 RUFY4Q6ZNE9 571 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 PXDNLA1KZ92 1463 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 PIK3C2BO00750 1634 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 MECOMQ03112 1051 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 FBF1Q8TES7 1133 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 EEF2KMTQ96G04 330 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 GDAP1L1Q96MZ0 367 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 PHLPP2Q6ZVD8 1323 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 ATP5DP30049 168 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 CYP2J2P51589 502 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 B4GALNT4Q76KP1 1039 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 MIER3Q7Z3K6 550 aa15.21■□□□□ 0.03
GGA3-220ENST00000613421 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 U2AF1L4Q8WU68 220 aaKnown RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 SAMSN1Q9NSI8 373 aaKnown RBP15.21■□□□□ 0.03
GGA3-220ENST00000613421 USP17L8P0C7I0 530 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 POLR2FP61218 127 aaKnown RBP15.21■□□□□ 0.02
GGA3-220ENST00000613421 TTC31Q49AM3 519 aaPredicted RBP15.21■□□□□ 0.02
GGA3-220ENST00000613421 RESP18Q5W5W9 173 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 RDH13Q8NBN7 331 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 SWAP70Q9UH65 585 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 CDC23Q9UJX2 597 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 NEDD4P46934 1319 aa15.21■□□□□ 0.02
GGA3-220ENST00000613421 TCP1P17987 556 aaKnown RBP15.2■□□□□ 0.02
GGA3-220ENST00000613421 ADAM9Q13443 819 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 TSGA10IPQ3SY00 556 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 ZNF365Q70YC5 407 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 P2RX5Q93086 422 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 MYL1P05976 194 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 GBP6Q6ZN66 633 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 RABGGTAQ92696 567 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 BRIP1Q9BX63 1249 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 TNS3Q68CZ2 1445 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 APBA3O96018 575 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 SREK1Q8WXA9 508 aaKnown RBP15.2■□□□□ 0.02
GGA3-220ENST00000613421 CCDC17Q96LX7 622 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 ISCA1Q9BUE6 129 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 NKIRAS1Q9NYS0 192 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 STK36Q9NRP7 1315 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 POLR2MP0CAP2 368 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 FOXO4P98177 505 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 RWDD2AQ9UIY3 292 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 AMFRQ9UKV5 643 aa15.2■□□□□ 0.02
GGA3-220ENST00000613421 hCG_1984214I3L0E3 225 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 BUB1O43683 1085 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 KCNQ4P56696 695 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 TRPC3Q13507 836 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 NIM1KQ8IY84 436 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 SLC35F6Q8N357 371 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 ZNF713Q8N859 430 aaPredicted RBP15.19■□□□□ 0.02
GGA3-220ENST00000613421 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 PAGE5Q96GU1 130 aa15.19■□□□□ 0.02
GGA3-220ENST00000613421 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms