RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 LRRC37BQ96QE4 947 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 MIS12Q9H081 205 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 ABCF3Q9NUQ8 709 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-206ENST00000613296 PAIP2BQ9ULR5 123 aaKnown RBP9.13□□□□□ -0.95
ALMS1-206ENST00000613296 TSC22D4Q9Y3Q8 395 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 PTPRGP23470 1445 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
ALMS1-206ENST00000613296 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
ALMS1-206ENST00000613296 RAPGEF5Q92565 580 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 CAPRIN1Q14444 709 aaKnown RBP9.13□□□□□ -0.95
ALMS1-206ENST00000613296 RPS6KC1Q96S38 1066 aa9.13□□□□□ -0.95
ALMS1-206ENST00000613296 FANCCQ00597 558 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 POLKQ9UBT6 870 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 ZNF644Q9H582 1327 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 CHEK2O96017 543 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 SLC9C2Q5TAH2 1124 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 ZSCAN9O15535 394 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TOM1L1O75674 476 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TRAPPC10P48553 1259 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 KCNA1Q09470 495 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TRIM67Q6ZTA4 783 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 NELFBQ8WX92 580 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 IMPACTQ9P2X3 320 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 KRT75O95678 551 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RFC4P35249 363 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 ATL3Q6DD88 541 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RRAGAQ7L523 313 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 DDX39AO00148 427 aaKnown RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RIMBP2O15034 1052 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 GSNP06396 782 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PMLP29590 882 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 BFSP1Q12934 665 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 ANGPT1Q15389 498 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TRIML1Q8N9V2 468 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PTPN22Q9Y2R2 807 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PSDA5PKW4 1024 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 KCTD16Q68DU8 428 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 SESTD1Q86VW0 696 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 KCNH3Q9ULD8 1083 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 KDRP35968 1356 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TMEM232C9JQI7 657 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RASGRF2O14827 1237 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TADA3O75528 432 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PRDM1O75626 825 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 CPP00450 1065 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 HSPA6P17066 643 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RARSP54136 660 aaKnown RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TTBK2Q6IQ55 1244 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TTLL11Q8NHH1 800 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 OTUB1Q96FW1 271 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 NR1I2O75469 434 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 HSPD1P10809 573 aaKnown RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 GINS4Q9BRT9 223 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 TAB2Q9NYJ8 693 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 LRMPQ12912 555 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 CCDC142Q17RM4 750 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 HABP4Q5JVS0 413 aaKnown RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 RYBPQ8N488 228 aaPredicted RBP9.12□□□□□ -0.95
ALMS1-206ENST00000613296 ATP11BQ9Y2G3 1177 aa9.12□□□□□ -0.95
ALMS1-206ENST00000613296 PDE6CP51160 858 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 ZNF75DP51815 510 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 PTPROQ16827 1216 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 JPH4Q96JJ6 628 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 C1orf112Q9NSG2 853 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 MYCP01106 439 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 PYGBP11216 843 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SCYL2Q6P3W7 929 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 BTN2A2Q8WVV5 523 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 OPTNQ96CV9 577 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 RUNDC3BQ96NL0 473 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 CYTH2Q99418 400 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SNX5Q9Y5X3 404 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 BRD2P25440 801 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 TMED2Q15363 201 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SLFN5Q08AF3 891 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SUN2Q9UH99 717 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 ARMC2Q8NEN0 867 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 ZBTB18Q99592 522 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SLC12A5Q9H2X9 1139 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 LMCD1Q9NZU5 365 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 NCF2P19878 526 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 PATL1Q86TB9 770 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 KCNH5Q8NCM2 988 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 B4GALNT2Q8NHY0 566 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 INTS9Q9NV88 658 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 EIF3CLB5ME19 914 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 TCF3P15923 654 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 KIF19Q2TAC6 998 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 MTBPQ96DY7 904 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 EIF3CQ99613 913 aaKnown RBP9.11□□□□□ -0.95
ALMS1-206ENST00000613296 SPZ1Q9BXG8 430 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 KLHL31Q9H511 634 aa9.11□□□□□ -0.95
ALMS1-206ENST00000613296 CAB39Q9Y376 341 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms