RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
SSX3-204ENST00000612497 COL4A4P53420 1690 aaPredicted RBP12.46□□□□□ -0.41
SSX3-204ENST00000612497 DNAJC25-GNG10A0A024R161 153 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 CABYRO75952 493 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 PFKMP08237 780 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 ACTN1P12814 892 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 AKR1B1P15121 316 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
SSX3-204ENST00000612497 SNRNP48Q6IEG0 339 aaKnown RBP12.46□□□□□ -0.41
SSX3-204ENST00000612497 ARMCX2Q7L311 632 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 REPS2Q8NFH8 660 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 AGBL1Q96MI9 1066 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 TEX13BQ9BXU2 312 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 GPR108Q9NPR9 543 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 RIPK3Q9Y572 518 aa12.46□□□□□ -0.41
SSX3-204ENST00000612497 GRIN2DO15399 1336 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 MAGEB6P1A0A0J9YX57 407 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 PNMA6EA0A0J9YXQ4 647 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 E9PSI1 815 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 LPXNO60711 386 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 CYP2D6P10635 497 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 NKX3-2P78367 333 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 TNFAIP2Q03169 654 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 FAM83BQ5T0W9 1011 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 FAM9BQ8IZU0 186 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 PHOSPHO2Q8TCD6 241 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 DYNLL2Q96FJ2 89 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 RIOK1Q9BRS2 568 aaKnown RBP12.45□□□□□ -0.42
SSX3-204ENST00000612497 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
SSX3-204ENST00000612497 UBE2ZQ9H832 354 aaPredicted RBP12.45□□□□□ -0.42
SSX3-204ENST00000612497 GOPCQ9HD26 462 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 SWAP70Q9UH65 585 aa12.45□□□□□ -0.42
SSX3-204ENST00000612497 ZNF318Q5VUA4 2279 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 ZEB2O60315 1214 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
SSX3-204ENST00000612497 KCNA5P22460 613 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 PSMC6P62333 389 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 FSCN1Q16658 493 aaKnown RBP12.44□□□□□ -0.42
SSX3-204ENST00000612497 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 HERC6Q8IVU3 1022 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 CCDC144CPQ8IYA2 1237 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 CPXCR1Q8N123 301 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 ANKRD35Q8N283 1001 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 SEZ6LQ9BYH1 1024 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 AP5M1Q9H0R1 490 aa12.44□□□□□ -0.42
SSX3-204ENST00000612497 ASTN1O14525 1302 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 ZNF536O15090 1300 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 CFAP54Q96N23 3096 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.43□□□□□ -0.42
SSX3-204ENST00000612497 DCXO43602 365 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 GNAI2P04899 355 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 CYP2C9P11712 490 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 IL9P15248 144 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 LEXMQ3ZCV2 418 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 SPRED2Q7Z698 418 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.43□□□□□ -0.42
SSX3-204ENST00000612497 GDPD5Q8WTR4 605 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 FGD4Q96M96 766 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 FTOQ9C0B1 505 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSX3-204ENST00000612497 ANTXR1Q9H6X2 564 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
SSX3-204ENST00000612497 CTDP1Q9Y5B0 961 aaPredicted RBP12.43□□□□□ -0.42
SSX3-204ENST00000612497 TRIOO75962 3097 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 DYNC1LI2O43237 492 aaPredicted RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 ABCB7O75027 752 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 SUPT20HL2P0C7V6 817 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 PTCRAQ6ISU1 281 aaPredicted RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 TMED8Q6PL24 325 aaPredicted RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 TET1Q8NFU7 2136 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 PHOX2BQ99453 314 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 SLF1Q9BQI6 1058 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 KATNBL1Q9H079 304 aa12.42□□□□□ -0.42
SSX3-204ENST00000612497 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 TLR7Q9NYK1 1049 aaKnown RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 DBNLQ9UJU6 430 aaKnown RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
SSX3-204ENST00000612497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.41□□□□□ -0.42
SSX3-204ENST00000612497 PTGS1P23219 599 aa12.41□□□□□ -0.42
SSX3-204ENST00000612497 NUP88Q99567 741 aaPredicted RBP12.41□□□□□ -0.42
SSX3-204ENST00000612497 KANSL2Q9H9L4 492 aa12.41□□□□□ -0.42
SSX3-204ENST00000612497 DCP1AQ9NPI6 582 aaPredicted RBP12.41□□□□□ -0.42
SSX3-204ENST00000612497 GNEQ9Y223 722 aaKnown RBP12.41□□□□□ -0.42
SSX3-204ENST00000612497 ZDBF2Q9HCK1 2354 aa12.41□□□□□ -0.42
SSX3-204ENST00000612497 TNKSO95271 1327 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 CACNA1AO00555 2505 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 LCHNA4D1U4 455 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 ST18O60284 1047 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 ZBED4O75132 1171 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
SSX3-204ENST00000612497 RFC2P35250 354 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 KCNJ6P48051 423 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 CNTN2Q02246 1040 aa12.4□□□□□ -0.42
SSX3-204ENST00000612497 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms