RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PES1O00541 588 aaKnown RBP15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 MYO1BO43795 1136 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 LONP1P36776 959 aaKnown RBP15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 UBA7P41226 1012 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 TECP42680 631 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 PROM2Q8N271 834 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 NEDD1Q8NHV4 660 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 UBR3Q6ZT12 1888 aa15.9■□□□□ 0.14
PCDHGA3-202ENST00000612467 A0A0U1RQG5 324 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 KIF2AO00139 706 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 STX10O60499 249 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 PLCG1P19174 1290 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 HSPA1LP34931 641 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 ATP2B2Q01814 1243 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 DPP8Q6V1X1 898 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 POTEDQ86YR6 584 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 ACRBPQ8NEB7 543 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 SH3GLB2Q9NR46 395 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 TCP11L1Q9NUJ3 509 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 MORC2Q9Y6X9 1032 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 PPFIBP1Q86W92 1011 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 IRF2BP1Q8IU81 584 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 TBCKQ8TEA7 893 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZSWIM4Q9H7M6 989 aa15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
PCDHGA3-202ENST00000612467 KCNJ18B7U540 433 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 RAD21O60216 631 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 SLC16A2P36021 539 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 GNAQP50148 359 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 KCNJ12Q14500 433 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 SYCP1Q15431 976 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZNF658Q5TYW1 1059 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ARL6IP4Q66PJ3 421 aaKnown RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 TTBK2Q6IQ55 1244 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 GPIHBP1Q8IV16 184 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZNF446Q9NWS9 450 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZSCAN12O43309 604 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 KLRC4O43908 158 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 TXLNAP40222 546 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 COPB1P53618 953 aaKnown RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZFPM1Q8IX07 1006 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 CCDC148Q8NFR7 591 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 CGNQ9P2M7 1197 aaKnown RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 MFAP3LO75121 409 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 FCER1AP12319 257 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ERCC3P19447 782 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ARHGAP29Q52LW3 1261 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 C15orf52Q6ZUT6 534 aaKnown RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 ST7Q9NRC1 585 aa15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 TTF2Q9UNY4 1162 aaKnown RBP15.88■□□□□ 0.13
PCDHGA3-202ENST00000612467 PDHBP11177 359 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 TXKP42681 527 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 ERVK-24P63145 666 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 NFIAQ12857 509 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 UBE2SQ16763 222 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 TCP11X2Q5H9J9 407 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 RRP36Q96EU6 259 aaKnown RBP15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 RWDD2AQ9UIY3 292 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 PHLPP2Q6ZVD8 1323 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 TDP2O95551 362 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 CCDC178Q5BJE1 867 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 CABP7Q86V35 215 aa15.87■□□□□ 0.13
PCDHGA3-202ENST00000612467 GAKO14976 1311 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 SLC37A4O43826 429 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 EDIL3O43854 480 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 BBOX1O75936 387 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 KLK7P49862 253 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 ZNF397Q8NF99 534 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 KIFC2Q96AC6 838 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 SPZ1Q9BXG8 430 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 SEC63Q9UGP8 760 aaKnown RBP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 ADGRG1Q9Y653 693 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 SPATA31A6Q5VVP1 1343 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 OR52Z1P0C646 297 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 CASQ1P31415 396 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 UBXN1Q04323 297 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 NONOQ15233 471 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 FILIP1LQ4L180 1135 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 ADSSL1Q8N142 457 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 DAGLBQ8NCG7 672 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 CHP1Q99653 195 aa15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 SRRTQ9BXP5 876 aaKnown RBP15.86■□□□□ 0.13
PCDHGA3-202ENST00000612467 MPHOSPH10O00566 681 aaKnown RBP15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 ADRA2BP18089 450 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 TCP10Q12799 353 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 STK4Q13043 487 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 NUDT12Q9BQG2 462 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 MMTAG2Q9BU76 263 aaKnown RBP15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 DBNDD1Q9H9R9 158 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 MTMR4Q9NYA4 1195 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 POTEMA6NI47 508 aa15.85■□□□□ 0.13
PCDHGA3-202ENST00000612467 PPP1R11O60927 126 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms