RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FANCGO15287 622 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 RASA1P20936 1047 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 PTPN21Q16825 1174 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 PFKFB3Q16875 520 aaPredicted RBP16.63■□□□□ 0.25
CDH1-213ENST00000612417 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 KAT14Q9H8E8 782 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 PCDHAC2Q9Y5I4 1007 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 RAD17O75943 681 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 PTGDRQ13258 359 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 E2F4Q16254 413 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 CCDC178Q5BJE1 867 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 MRIQ9BWK5 157 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 IL17RBQ9NRM6 502 aa16.63■□□□□ 0.25
CDH1-213ENST00000612417 DDX60LQ5H9U9 1706 aaKnown RBP16.62■□□□□ 0.25
CDH1-213ENST00000612417 CD44P16070 742 aaKnown RBP16.62■□□□□ 0.25
CDH1-213ENST00000612417 PBX1P40424 430 aa16.62■□□□□ 0.25
CDH1-213ENST00000612417 AFMP43652 599 aa16.62■□□□□ 0.25
CDH1-213ENST00000612417 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
CDH1-213ENST00000612417 ZNF174Q15697 407 aa16.62■□□□□ 0.25
CDH1-213ENST00000612417 ERCC6LQ2NKX8 1250 aa16.62■□□□□ 0.25
CDH1-213ENST00000612417 NOM1Q5C9Z4 860 aaKnown RBP16.62■□□□□ 0.25
CDH1-213ENST00000612417 IPO4Q8TEX9 1081 aaKnown RBP16.62■□□□□ 0.25
CDH1-213ENST00000612417 PPP1R3GB7ZBB8 358 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 KIF5BP33176 963 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 RCSD1Q6JBY9 416 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 LRRN4CLQ8ND94 238 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 UPF1Q92900 1129 aaKnown RBP eCLIP16.61■□□□□ 0.255e-8■□□□□ 9.3
CDH1-213ENST00000612417 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 SERPINA10Q9UK55 444 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 MYH8P13535 1937 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 CACNB3P54284 484 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 ARL6IP4Q66PJ3 421 aaKnown RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 DGKHQ86XP1 1220 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 IQUBQ8NA54 791 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 BBXQ8WY36 941 aaPredicted RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 NAA15Q9BXJ9 866 aaKnown RBP16.61■□□□□ 0.25
CDH1-213ENST00000612417 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 STX8Q9UNK0 236 aa16.61■□□□□ 0.25
CDH1-213ENST00000612417 AKR1B15C9JRZ8 316 aaPredicted RBP16.6■□□□□ 0.25
CDH1-213ENST00000612417 CALML3P27482 149 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 TCP10Q12799 353 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 NFIAQ12857 509 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 PDXDC2PQ6P474 469 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 KRT222Q8N1A0 295 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 ANKS1AQ92625 1134 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 TCP11L1Q9NUJ3 509 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 PSMD14O00487 310 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 TADA3O75528 432 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 NLRP5P59047 1200 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 GABPB1Q06547 395 aaPredicted RBP16.6■□□□□ 0.25
CDH1-213ENST00000612417 TOGARAM2Q6ZUX3 1019 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 PNMA1Q8ND90 353 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 MTMR7Q9Y216 660 aa16.6■□□□□ 0.25
CDH1-213ENST00000612417 ITIH6Q6UXX5 1313 aa16.59■□□□□ 0.25
CDH1-213ENST00000612417 EFCAB8A8MWE9 144 aa16.59■□□□□ 0.25
CDH1-213ENST00000612417 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
CDH1-213ENST00000612417 PIK3AP1Q6ZUJ8 805 aa16.59■□□□□ 0.25
CDH1-213ENST00000612417 SERPINB13Q9UIV8 391 aa16.59■□□□□ 0.25
CDH1-213ENST00000612417 PSME4Q14997 1843 aa16.59■□□□□ 0.25
CDH1-213ENST00000612417 TEX33O43247 280 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 GTPBP6O43824 516 aaPredicted RBP16.58■□□□□ 0.25
CDH1-213ENST00000612417 URI1O94763 535 aaPredicted RBP16.58■□□□□ 0.25
CDH1-213ENST00000612417 CASP1P29466 404 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 ZSCAN29Q8IWY8 852 aaPredicted RBP16.58■□□□□ 0.25
CDH1-213ENST00000612417 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 VPS33BQ9H267 617 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 ZNF446Q9NWS9 450 aa16.58■□□□□ 0.25
CDH1-213ENST00000612417 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 TPM1P09493 284 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 FECHP22830 423 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 LONP1P36776 959 aaKnown RBP16.58■□□□□ 0.24
CDH1-213ENST00000612417 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 IL17AQ16552 155 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 FILIP1LQ4L180 1135 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 ARHGAP29Q52LW3 1261 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 ZFPM1Q8IX07 1006 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 IGSF22Q8N9C0 903 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 UBXN4Q92575 508 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 KIFC2Q96AC6 838 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 TDRD3Q9H7E2 651 aaKnown RBP16.58■□□□□ 0.24
CDH1-213ENST00000612417 ZNRF3Q9ULT6 936 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 BCS1LQ9Y276 419 aa16.58■□□□□ 0.24
CDH1-213ENST00000612417 LRRC10BA6NIK2 292 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 CCDC175P0C221 793 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 CASQ1P31415 396 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 CCDC51Q96ER9 411 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 WDR24Q96S15 920 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 TMEM47Q9BQJ4 181 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 TAOK3Q9H2K8 898 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 RWDD2AQ9UIY3 292 aa16.57■□□□□ 0.24
CDH1-213ENST00000612417 VIL1P09327 827 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms