RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SMCO2A6NFE2 343 aa20.16■□□□□ 0.82
SREK1-216ENST00000612404 CLEC17AQ6ZS10 378 aa20.16■□□□□ 0.82
SREK1-216ENST00000612404 SMC1BQ8NDV3 1235 aa20.16■□□□□ 0.82
SREK1-216ENST00000612404 RANBP17Q9H2T7 1088 aaKnown RBP20.16■□□□□ 0.82
SREK1-216ENST00000612404 PPP1R9AQ9ULJ8 1098 aa20.16■□□□□ 0.82
SREK1-216ENST00000612404 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
SREK1-216ENST00000612404 GJA5P36382 358 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 NPY5RQ15761 445 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 TREML2Q5T2D2 321 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 NOSTRINQ8IVI9 506 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 BLIDQ8IZY5 108 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 FAM177A1Q8N128 213 aaPredicted RBP20.15■□□□□ 0.82
SREK1-216ENST00000612404 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L15C9J2P7 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L13C9JLJ4 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L11C9JVI0 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L18D6R9N7 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L22D6RA61 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L17D6RBQ6 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L19D6RCP7 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L20D6RJB6 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 HUNKP57058 714 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 USP17L24Q0WX57 530 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 MKRN3Q13064 507 aaKnown RBP20.15■□□□□ 0.82
SREK1-216ENST00000612404 ZMYND12Q9H0C1 365 aa20.15■□□□□ 0.82
SREK1-216ENST00000612404 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
SREK1-216ENST00000612404 GNA11P29992 359 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 GALNT17Q6IS24 598 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 PPP1R18Q6NYC8 613 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 CATSPERGQ6ZRH7 1159 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 PROCA1Q8NCQ7 364 aaPredicted RBP20.14■□□□□ 0.81
SREK1-216ENST00000612404 CNPY2Q9Y2B0 182 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 PASKQ96RG2 1323 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 TCHHQ07283 1943 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 ADAMTS3O15072 1205 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 SNAPC2Q13487 334 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 NFKBIBQ15653 356 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 WNK4Q96J92 1243 aa20.14■□□□□ 0.81
SREK1-216ENST00000612404 TFIP11Q9UBB9 837 aaKnown RBP20.14■□□□□ 0.81
SREK1-216ENST00000612404 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
SREK1-216ENST00000612404 ADCY7P51828 1080 aa20.13■□□□□ 0.81
SREK1-216ENST00000612404 COG2Q14746 738 aa20.13■□□□□ 0.81
SREK1-216ENST00000612404 ATG4CQ96DT6 458 aa20.13■□□□□ 0.81
SREK1-216ENST00000612404 ESYT2A0FGR8 921 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 GOLGA6L22H0YM25 854 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 YY1P25490 414 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 MCM4P33991 863 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 KRT85P78386 507 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 MYSM1Q5VVJ2 828 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 FASTKD5Q7L8L6 764 aaKnown RBP20.12■□□□□ 0.81
SREK1-216ENST00000612404 RASGRP4Q8TDF6 673 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 GDPD2Q9HCC8 539 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 LOC285556D6RIA3 1793 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 FIBPO43427 364 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 ZBED4O75132 1171 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 DSG3P32926 999 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 CEBPZQ03701 1054 aaKnown RBP20.12■□□□□ 0.81
SREK1-216ENST00000612404 TRAF1Q13077 416 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 CPXCR1Q8N123 301 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 DAGLBQ8NCG7 672 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 BICD2Q8TD16 824 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 ZNF396Q96N95 335 aaPredicted RBP20.12■□□□□ 0.81
SREK1-216ENST00000612404 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 SLC38A10Q9HBR0 1119 aa20.12■□□□□ 0.81
SREK1-216ENST00000612404 MYH15Q9Y2K3 1946 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 PARP14Q460N5 1801 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 VWA5AO00534 786 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 CUL5Q93034 780 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 HOXC10Q9NYD6 342 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 TOMM70O94826 608 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 NOM1Q5C9Z4 860 aaKnown RBP20.11■□□□□ 0.81
SREK1-216ENST00000612404 REXO1Q8N1G1 1221 aaKnown RBP20.11■□□□□ 0.81
SREK1-216ENST00000612404 AGBL1Q96MI9 1066 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 RIC8AQ9NPQ8 531 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 CCPG1Q9ULG6 757 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 PCDHA6Q9UN73 950 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 AGTPBP1Q9UPW5 1226 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 PCDHA8Q9Y5H6 950 aa20.11■□□□□ 0.81
SREK1-216ENST00000612404 FAM205CA6NFA0 338 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 ICAM1P05362 532 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 FDX1P10109 184 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 GTF2A2P52657 109 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 MRPL12P52815 198 aaKnown RBP20.1■□□□□ 0.81
SREK1-216ENST00000612404 EARS2Q5JPH6 523 aaKnown RBP20.1■□□□□ 0.81
SREK1-216ENST00000612404 SPRYD7Q5W111 196 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 FTOQ9C0B1 505 aaKnown RBP eCLIP20.1■□□□□ 0.81
SREK1-216ENST00000612404 RAVER2Q9HCJ3 691 aaKnown RBP20.1■□□□□ 0.81
SREK1-216ENST00000612404 BIN2Q9UBW5 565 aaPredicted RBP20.1■□□□□ 0.81
SREK1-216ENST00000612404 CFAP45Q9UL16 551 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 SMCHD1A6NHR9 2005 aa20.1■□□□□ 0.81
SREK1-216ENST00000612404 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 HOXA7P31268 230 aaPredicted RBP20.09■□□□□ 0.81
SREK1-216ENST00000612404 ZNF157P51786 506 aaPredicted RBP20.09■□□□□ 0.81
SREK1-216ENST00000612404 IRX3P78415 501 aaPredicted RBP20.09■□□□□ 0.81
SREK1-216ENST00000612404 MOGSQ13724 837 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 SAPCD2Q86UD0 394 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 USP28Q96RU2 1077 aa20.09■□□□□ 0.81
SREK1-216ENST00000612404 RLFQ13129 1914 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms