RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 RIPOR2Q9Y4F9 1068 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 IKBKGQ9Y6K9 419 aa9.52□□□□□ -0.88
TMCO1-208ENST00000612311 CEP104O60308 925 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 COBLO75128 1261 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 ZBED4O75132 1171 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 ATP1A3P13637 1013 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 KRT5P13647 590 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 WHAMMP3Q1A5X7 153 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 SEL1L2Q5TEA6 688 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 GSTA5Q7RTV2 222 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 SLFN12Q8IYM2 578 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 KIFAP3Q92845 792 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 EPSTI1Q96J88 318 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PDLIM2Q96JY6 352 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 RPGRIP1Q96KN7 1286 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 NEDD4P46934 1319 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 ABCC12Q96J65 1359 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 A0A1W2PRG0 241 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 ATP2A1O14983 1001 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PTPN21Q16825 1174 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 CCDC25Q86WR0 208 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PPP1R13BQ96KQ4 1090 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 LSM14BQ9BX40 385 aaKnown RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 AMNQ9BXJ7 453 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 IL25Q9H293 177 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 SAMSN1Q9NSI8 373 aaKnown RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TMOD4Q9NZQ9 345 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PXDNLA1KZ92 1463 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 EFCAB8A8MWE9 144 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TMEM232C9JQI7 657 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TTLL1O95922 423 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 FOSP01100 380 aaPredicted RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 NT5C2P49902 561 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 GABPB1Q06547 395 aaPredicted RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 RPS6KA1Q15418 735 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 CFAP221Q4G0U5 840 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TMTC3Q6ZXV5 915 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 IFT20Q8IY31 132 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TRIM58Q8NG06 486 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TBCKQ8TEA7 893 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 CELF1Q92879 486 aaKnown RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 PIGSQ96S52 555 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 MTA3Q9BTC8 594 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 STMN4Q9H169 189 aaPredicted RBP9.52□□□□□ -0.89
TMCO1-208ENST00000612311 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
TMCO1-208ENST00000612311 STK36Q9NRP7 1315 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 USP17L3A6NCW0 530 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 USP17L4A6NCW7 530 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 ATP2C2O75185 946 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 EEF1GP26641 437 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 PPP1R7Q15435 360 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 ABCB5Q2M3G0 1257 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 USP17L1Q7RTZ2 530 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 LARP4BQ92615 738 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 FERMT1Q9BQL6 677 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 SMIM23A6NLE4 172 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 EXOSC10Q01780 885 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 MAPK8IP2Q13387 824 aaPredicted RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 SARM1Q6SZW1 724 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 FMR1NBQ8N0W7 255 aaPredicted RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 FNBP4Q8N3X1 1017 aaPredicted RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 CNOT6LQ96LI5 555 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 CTTNBP2NLQ9P2B4 639 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 GSG1L2A8MUP6 293 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 TRIM37O94972 964 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 CHGBP05060 677 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 STAT1P42224 750 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 CYP4A11Q02928 519 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 BRD3Q15059 726 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 LY9Q9HBG7 655 aa9.51□□□□□ -0.89
TMCO1-208ENST00000612311 MRPL11Q9Y3B7 192 aaKnown RBP9.51□□□□□ -0.89
TMCO1-208ENST00000612311 TCP10L2B9ZVM9 353 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 BCRP11274 1271 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 CDC27P30260 824 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PDIA6Q15084 440 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ZNF658Q5TYW1 1059 aaPredicted RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 DPH6Q7L8W6 267 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PEX26Q7Z412 305 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 VSTM4Q8IW00 320 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 UBLCP1Q8WVY7 318 aaPredicted RBP9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PLCD4Q9BRC7 762 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 KIAA1024Q9UPX6 916 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 USP32Q8NFA0 1604 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 REREQ9P2R6 1566 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 POLR2MP0CAP2 368 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 CYP2D6P10635 497 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
TMCO1-208ENST00000612311 ARL6IP4Q66PJ3 421 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms