RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 KIAA0825Q8IV33 1275 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 IFT20Q8IY31 132 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 NBPF15Q8N660 670 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 ANKRD42Q8N9B4 389 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 SLC44A5Q8NCS7 719 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 LMBR1Q8WVP7 490 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 WDR24Q96S15 920 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 PIGSQ96S52 555 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 USP40Q9NVE5 1235 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 PANK4Q9NVE7 773 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 MYO3AQ8NEV4 1616 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 ARHGEF40Q8TER5 1519 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 A2ML1A8K2U0 1454 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 LOC102724428A0A0B4J2F2 783 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 FRMD3A2A2Y4 597 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 H7C1W4 665 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 CLIC2O15247 247 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 GTPBP6O43824 516 aaPredicted RBP4.21□□□□□ -1.74
RNF38-210ENST00000611646 RNF40O75150 1001 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 OR52Z1P0C646 297 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 HNRNPH2P55795 449 aaKnown RBP4.21□□□□□ -1.74
RNF38-210ENST00000611646 SIK1P57059 783 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 CFAP221Q4G0U5 840 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 PNMA8AQ86V59 439 aaPredicted RBP4.21□□□□□ -1.74
RNF38-210ENST00000611646 BCAS4Q8TDM0 211 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 STRBPQ96SI9 672 aaKnown RBP4.21□□□□□ -1.74
RNF38-210ENST00000611646 CDC23Q9UJX2 597 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 TFR2Q9UP52 801 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 KIAA1024Q9UPX6 916 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 PTPN22Q9Y2R2 807 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 UTP11Q9Y3A2 253 aaKnown RBP4.21□□□□□ -1.74
RNF38-210ENST00000611646 AK9Q5TCS8 1911 aa4.21□□□□□ -1.74
RNF38-210ENST00000611646 HEG1Q9ULI3 1381 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 UBN2Q6ZU65 1347 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 IKBKBO14920 756 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 EXOC3O60645 756 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ERCC5P28715 1186 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 CTNNA1P35221 906 aaKnown RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 MXRA7P84157 204 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 FOXO4P98177 505 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 KRT31Q15323 416 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 KRT71Q3SY84 523 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 RESP18Q5W5W9 173 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ATG9AQ7Z3C6 839 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CCDC91Q7Z6B0 441 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 NEK8Q86SG6 692 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 OGFOD1Q8N543 542 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PROCA1Q8NCQ7 364 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 TBCKQ8TEA7 893 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 HPS3Q969F9 1004 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 FOXP1Q9H334 677 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 KANSL2Q9H9L4 492 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ARPP21Q9UBL0 812 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 DDX25Q9UHL0 483 aaKnown RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 DNM3Q9UQ16 869 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 IKBKGQ9Y6K9 419 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CAPN7Q9Y6W3 813 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CFAP74Q9C0B2 1584 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CCDC172P0C7W6 258 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PLCG2P16885 1265 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PRDX5P30044 214 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 MECOMQ03112 1051 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 GRIN1Q05586 938 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PABPC4Q13310 644 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNF38-210ENST00000611646 BRD3Q15059 726 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 WHAMMP3Q1A5X7 153 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 USP49Q70CQ1 688 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 MB21D2Q8IYB1 491 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 MYOCDQ8IZQ8 938 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ANKS4BQ8N8V4 417 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 FAM133AQ8N9E0 248 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CCDC63Q8NA47 563 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 FBF1Q8TES7 1133 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 RBM17Q96I25 401 aaKnown RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 NUP58Q9BVL2 599 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PSTPIP2Q9H939 334 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PCDHA12Q9UN75 941 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 LAMC1P11047 1609 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 SFI1A8K8P3 1242 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 KRIT1O00522 736 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CTDNEP1O95476 244 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 SLFN14P0C7P3 912 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PLCG1P19174 1290 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 RPL13P26373 211 aaKnown RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 CACNB3P54284 484 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 FMR1Q06787 632 aaKnown RBP eCLIP4.2□□□□□ -1.74
RNF38-210ENST00000611646 CALCOCO2Q13137 446 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ADAM9Q13443 819 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 COL9A3Q14050 684 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 SEL1L2Q5TEA6 688 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 CCDC105Q8IYK2 499 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ZNF710Q8N1W2 664 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 PPP1R14CQ8TAE6 165 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 WDR66Q8TBY9 1149 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 TACO1Q9BSH4 297 aaKnown RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 NHEJ1Q9H9Q4 299 aaPredicted RBP4.2□□□□□ -1.74
RNF38-210ENST00000611646 LY9Q9HBG7 655 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 SAMD15Q9P1V8 674 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 ASIC3Q9UHC3 531 aa4.2□□□□□ -1.74
RNF38-210ENST00000611646 BCS1LQ9Y276 419 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms