RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 P2RX5Q93086 422 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 BUB1O43683 1085 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 NF2P35240 595 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ACTN2P35609 894 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 FAM26FQ5R3K3 315 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
CDH1-212ENST00000611625 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 LY9Q9HBG7 655 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 PCDHA12Q9UN75 941 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 STK24Q9Y6E0 443 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 ZNF804BA4D1E1 1349 aa13.76□□□□□ -0.21
CDH1-212ENST00000611625 NBPF26B4DH59 902 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 GCNT3O95395 438 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 SCARF1Q14162 830 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 KMT5BQ4FZB7 885 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 NBPF10Q6P3W6 841 aaKnown RBP13.75□□□□□ -0.21
CDH1-212ENST00000611625 GSTA5Q7RTV2 222 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 DAAM2Q86T65 1068 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 IKBKGQ9Y6K9 419 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 SYCE1Q8N0S2 351 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 SYNE4Q8N205 404 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 AK8Q96MA6 479 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 ISCA1Q9BUE6 129 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 MRPL44Q9H9J2 332 aaKnown RBP13.75□□□□□ -0.21
CDH1-212ENST00000611625 PKD2L1Q9P0L9 805 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 FRMPD2Q68DX3 1309 aaPredicted RBP13.75□□□□□ -0.21
CDH1-212ENST00000611625 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 KRT31Q15323 416 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 TERF2Q15554 542 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 FAM98CQ17RN3 349 aaKnown RBP13.75□□□□□ -0.21
CDH1-212ENST00000611625 VEZTQ9HBM0 779 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 CEMIPQ8WUJ3 1361 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 PLEKHA8P1O95397 391 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 GUCY2FP51841 1108 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 ARMCX5Q6P1M9 558 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 SHC4Q6S5L8 630 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 IMPG2Q9BZV3 1241 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 PPLO60437 1756 aa13.75□□□□□ -0.21
CDH1-212ENST00000611625 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 GNGT1P63211 74 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
CDH1-212ENST00000611625 UBN2Q6ZU65 1347 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 SNAP23O00161 211 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 ATP2A1O14983 1001 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 NDUFA10O95299 355 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 MYL1P05976 194 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 XRCC5P13010 732 aaKnown RBP13.74□□□□□ -0.21
CDH1-212ENST00000611625 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
CDH1-212ENST00000611625 MYCT1Q8N699 235 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 KCNK9Q9NPC2 374 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 ARMCX3Q9UH62 379 aaPredicted RBP13.74□□□□□ -0.21
CDH1-212ENST00000611625 DEPDC5O75140 1603 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 BTDP43251 543 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 UBL4BQ8N7F7 174 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
CDH1-212ENST00000611625 ALX1Q15699 326 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 USH1GQ495M9 461 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 HINFPQ9BQA5 517 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 FAM204AQ9H8W3 233 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 PCDHB13Q9Y5F0 798 aa13.74□□□□□ -0.21
CDH1-212ENST00000611625 KCNK3O14649 394 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 PLCB3Q01970 1234 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 MTMR3Q13615 1198 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 SUSD4Q5VX71 490 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 FAN1Q9Y2M0 1017 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 GOLGA8KD6RF30 607 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 EXOC3O60645 756 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
CDH1-212ENST00000611625 CCZ1BP86790 482 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 CCZ1P86791 482 aaPredicted RBP13.73□□□□□ -0.21
CDH1-212ENST00000611625 WDR78Q5VTH9 848 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 SGMS1Q86VZ5 419 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 LARP4BQ92615 738 aaKnown RBP13.73□□□□□ -0.21
CDH1-212ENST00000611625 CDHR2Q9BYE9 1310 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 CCNE1P24864 410 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 CASP1P29466 404 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 ARHGAP25P42331 645 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 GTF2IP78347 998 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 PPARDQ03181 441 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 KRT71Q3SY84 523 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
CDH1-212ENST00000611625 ZBED6P86452 979 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 OXER1Q8TDS5 423 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 KCNB2Q92953 911 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 SYNCQ9H7C4 482 aa13.73□□□□□ -0.21
CDH1-212ENST00000611625 ADAMTS13Q76LX8 1427 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 MAP2P11137 1827 aaKnown RBP13.72□□□□□ -0.21
CDH1-212ENST00000611625 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 TCP11X2Q5H9J9 407 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 EXOC4Q96A65 974 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 CABS1Q96KC9 395 aa13.72□□□□□ -0.21
CDH1-212ENST00000611625 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms