RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 IFT74Q96LB3 600 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 NLRC4Q9NPP4 1024 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 GJC1P36383 396 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 IFI16Q16666 785 aaKnown RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 LEKR1Q6ZMV7 388 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 C11orf57Q6ZUT1 292 aaPredicted RBP8.11□□□□□ -1.11
CSDE1-218ENST00000610726 GLG1Q92896 1179 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 MXD3Q9BW11 206 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 MYO5BQ9ULV0 1848 aa8.11□□□□□ -1.11
CSDE1-218ENST00000610726 CNTNAP4Q9C0A0 1308 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 SLU7O95391 586 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 FOSP01100 380 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 STAT2P52630 851 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 ZFP91Q96JP5 570 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 NAA15Q9BXJ9 866 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 CCDC113Q9H0I3 377 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 PNPLA7Q6ZV29 1317 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 PSDA5PKW4 1024 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 TMEM110-MUSTN1A8MSY1 372 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 NEBLO76041 1014 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 HOXA13P31271 388 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 EXOSC10Q01780 885 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 PABPC4Q13310 644 aaKnown RBP eCLIP8.1□□□□□ -1.115e-11■■■□□ 15.5
CSDE1-218ENST00000610726 SPECC1LQ69YQ0 1117 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 AZI2Q9H6S1 392 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 CGNQ9P2M7 1197 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 SPDYE4A6NLX3 237 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 CACNB1Q02641 598 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 SEPT7Q16181 437 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 CDC37Q16543 378 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 NCAPG2Q86XI2 1143 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 MYOCDQ8IZQ8 938 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 KDM3AQ9Y4C1 1321 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 CALUO43852 315 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 NCBP1Q09161 790 aaKnown RBP8.1□□□□□ -1.11
CSDE1-218ENST00000610726 MORC3Q14149 939 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 TMEM179Q6ZVK1 233 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 SLFN12Q8IYM2 578 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 SLF1Q9BQI6 1058 aa8.1□□□□□ -1.11
CSDE1-218ENST00000610726 PLEKHG2Q9H7P9 1386 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 COL5A2P05997 1499 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 KCNJ18B7U540 433 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 DYNC1I1O14576 645 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 GUCY1A2P33402 732 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 KCNJ12Q14500 433 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 GNPTABQ3T906 1256 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 FAM26FQ5R3K3 315 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 SYDE2Q5VT97 1194 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 CRAMP1Q96RY5 1269 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 EPB41L4AQ9HCS5 686 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 SLFN14P0C7P3 912 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 CYP2J2P51589 502 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 IFFO1Q0D2I5 559 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 XKR9Q5GH70 373 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 C12orf60Q5U649 245 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 LRCH2Q5VUJ6 765 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 DEFB132Q7Z7B7 95 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 MCF2L2Q86YR7 1114 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 CLEC10AQ8IUN9 316 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 TRIML1Q8N9V2 468 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 ZNF341Q9BYN7 854 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 PANK4Q9NVE7 773 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 NRBP1Q9UHY1 535 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 DAGLAQ9Y4D2 1042 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 SRPRBQ9Y5M8 271 aaKnown RBP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 MEIS1O00470 390 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 ARHGAP6O43182 974 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 KRT5P13647 590 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 AKR1B1P15121 316 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 STRN3Q13033 797 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 STAG2Q8N3U4 1231 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 LARP4BQ92615 738 aaKnown RBP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 MLXIPQ9HAP2 919 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 BCCIPQ9P287 314 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 IMPACTQ9P2X3 320 aa8.09□□□□□ -1.11
CSDE1-218ENST00000610726 ZBTB12Q9Y330 459 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-218ENST00000610726 PNMA6FA0A0J9YX94 578 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 FSD2A1L4K1 749 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L15C9J2P7 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L13C9JLJ4 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L11C9JVI0 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L18D6R9N7 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L22D6RA61 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L17D6RBQ6 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L19D6RCP7 530 aa8.08□□□□□ -1.12
CSDE1-218ENST00000610726 USP17L20D6RJB6 530 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms