RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ARNTP27540 789 aa3.3□□□□□ -1.88
ITGB5-213ENST00000608945 MAPK7Q13164 816 aa3.3□□□□□ -1.88
ITGB5-213ENST00000608945 NRN1LQ496H8 165 aa3.3□□□□□ -1.88
ITGB5-213ENST00000608945 BORAQ6PGQ7 559 aa3.3□□□□□ -1.88
ITGB5-213ENST00000608945 HOMEZQ8IX15 550 aa3.3□□□□□ -1.88
ITGB5-213ENST00000608945 CPNE3O75131 537 aaKnown RBP3.29□□□□□ -1.88
ITGB5-213ENST00000608945 Q6ZPA2 131 aa3.29□□□□□ -1.88
ITGB5-213ENST00000608945 FAM129BQ96TA1 746 aa3.29□□□□□ -1.88
ITGB5-213ENST00000608945 RBCK1Q9BYM8 510 aa3.29□□□□□ -1.88
ITGB5-213ENST00000608945 PTGFRNQ9P2B2 879 aa3.29□□□□□ -1.88
ITGB5-213ENST00000608945 FAN1Q9Y2M0 1017 aa3.29□□□□□ -1.88
ITGB5-213ENST00000608945 SHISA3A0PJX4 238 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 PLSCR1O15162 318 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 RPL10P27635 214 aaKnown RBP3.28□□□□□ -1.88
ITGB5-213ENST00000608945 ARL4AP40617 200 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 RTP1P59025 263 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 LAPTM5Q13571 262 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 HSF5Q4G112 596 aaPredicted RBP3.28□□□□□ -1.88
ITGB5-213ENST00000608945 ZMYM5Q9UJ78 669 aa3.28□□□□□ -1.88
ITGB5-213ENST00000608945 TMEM82A0PJX8 343 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 ZBTB7CA1YPR0 619 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 EIF1AYO14602 144 aaKnown RBP3.27□□□□□ -1.89
ITGB5-213ENST00000608945 GPR182O15218 404 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 ATP2B2Q01814 1243 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 USP39Q53GS9 565 aaKnown RBP3.27□□□□□ -1.89
ITGB5-213ENST00000608945 FNDC7Q5VTL7 733 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 SND1Q7KZF4 910 aaKnown RBP eCLIP3.27□□□□□ -1.89
ITGB5-213ENST00000608945 TMC7Q7Z402 723 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 B3GNT8Q7Z7M8 397 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 DNAJB8Q8NHS0 232 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 ALKBH8Q96BT7 664 aaKnown RBP3.27□□□□□ -1.89
ITGB5-213ENST00000608945 NIF3L1Q9GZT8 377 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 RNF38Q9H0F5 515 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 EHD4Q9H223 541 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 TMEM39AQ9NV64 488 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 NLRP2Q9NX02 1062 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 PPP4R2Q9NY27 417 aa3.27□□□□□ -1.89
ITGB5-213ENST00000608945 U2SURPO15042 1029 aaKnown RBP3.26□□□□□ -1.89
ITGB5-213ENST00000608945 GADD45BO75293 160 aaPredicted RBP3.26□□□□□ -1.89
ITGB5-213ENST00000608945 ORC1Q13415 861 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 C9orf131Q5VYM1 1079 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 ATG9BQ674R7 924 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 PRPF40BQ6NWY9 871 aaKnown RBP3.26□□□□□ -1.89
ITGB5-213ENST00000608945 WAPLQ7Z5K2 1190 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 ASB16Q96NS5 453 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 PTPN18Q99952 460 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 PDGFDQ9GZP0 370 aaPredicted RBP3.26□□□□□ -1.89
ITGB5-213ENST00000608945 TRAK1Q9UPV9 953 aa3.26□□□□□ -1.89
ITGB5-213ENST00000608945 RBM47A0AV96 593 aaKnown RBP3.25□□□□□ -1.89
ITGB5-213ENST00000608945 PRAMEF27A3QJZ7 478 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 CDK4P11802 303 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 MAPK8P45983 427 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 CEBPAP49715 358 aaPredicted RBP3.25□□□□□ -1.89
ITGB5-213ENST00000608945 SURF1Q15526 300 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 USPL1Q5W0Q7 1092 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 ALG1LQ6GMV1 187 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 PRIMA1Q86XR5 153 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 GRIN3AQ8TCU5 1115 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 EXTL1Q92935 676 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 CCDC74AQ96AQ1 378 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 NPHS2Q9NP85 383 aa3.25□□□□□ -1.89
ITGB5-213ENST00000608945 GPN3Q9UHW5 284 aaPredicted RBP3.25□□□□□ -1.89
ITGB5-213ENST00000608945 PNMA6FA0A0J9YX94 578 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 TMEM238LA0A1B0GVL6 79 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 TREHO43280 583 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 RAMP2O60895 175 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 LRRN2O75325 713 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 PRKCAP17252 672 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 ETV3P41162 512 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 CCDC27Q2M243 656 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 FAM26FQ5R3K3 315 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 GALNT18Q6P9A2 607 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 ZPBP2Q6X784 338 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 TTLL7Q6ZT98 887 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 FBF1Q8TES7 1133 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 GZF1Q9H116 711 aaPredicted RBP3.24□□□□□ -1.89
ITGB5-213ENST00000608945 BCL11AQ9H165 835 aa3.24□□□□□ -1.89
ITGB5-213ENST00000608945 FADS2P1A8MWK0 482 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 ASGR2P07307 311 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 ADH4P08319 380 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 C1SP09871 688 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 EPHB4P54760 987 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 CYP4F8P98187 520 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 PPP2R3AQ06190 1150 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 DSC3Q14574 896 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 INPP5AQ14642 412 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 NR1I3Q14994 352 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 PRKD1Q15139 912 aaPredicted RBP3.23□□□□□ -1.89
ITGB5-213ENST00000608945 ENOX2Q16206 610 aaKnown RBP3.23□□□□□ -1.89
ITGB5-213ENST00000608945 EAPPQ56P03 285 aaPredicted RBP3.23□□□□□ -1.89
ITGB5-213ENST00000608945 GAREM2Q75VX8 874 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 WNT10AQ9GZT5 417 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 MMRN2Q9H8L6 949 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 SPG7Q9UQ90 795 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 TAF6LQ9Y6J9 622 aa3.23□□□□□ -1.89
ITGB5-213ENST00000608945 GIPC1O14908 333 aa3.22□□□□□ -1.89
ITGB5-213ENST00000608945 XRCC5P13010 732 aaKnown RBP3.22□□□□□ -1.89
ITGB5-213ENST00000608945 HOXB6P17509 224 aaKnown RBP3.22□□□□□ -1.89
ITGB5-213ENST00000608945 ERCC3P19447 782 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms