RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 H3BQ06 376 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-220ENST00000608858 UQCRFS1P1P0C7P4 283 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 CST5P28325 142 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-220ENST00000608858 TMEM63BQ5T3F8 832 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 HERC6Q8IVU3 1022 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-220ENST00000608858 RIPK3Q9Y572 518 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
CTCFL-220ENST00000608858 PTPRCP08575 1304 aa11.3□□□□□ -0.6
CTCFL-220ENST00000608858 MYO5AQ9Y4I1 1855 aaKnown RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 VWA5AO00534 786 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 DYNC1LI2O43237 492 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 IDH1O75874 414 aaKnown RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 CYP2D6P10635 497 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 LEXMQ3ZCV2 418 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 CPXCR1Q8N123 301 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 MAGEB6Q8N7X4 407 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 SLC43A3Q8NBI5 491 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 EHD4Q9H223 541 aa11.29□□□□□ -0.6
CTCFL-220ENST00000608858 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-220ENST00000608858 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 TNFAIP2Q03169 654 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 DYNLL2Q96FJ2 89 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 MFSD14AQ96MC6 490 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 MEIS3Q99687 375 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 DBNDD2Q9BQY9 259 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 ZBED2Q9BTP6 218 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 KCNH6Q9H252 994 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 SUGCTQ9HAC7 445 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 ADAMTS5Q9UNA0 930 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 A0A0G2JMZ2 1700 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 ASTN1O14525 1302 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 ZNF536O15090 1300 aa11.28□□□□□ -0.6
CTCFL-220ENST00000608858 COL11A1P12107 1806 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-220ENST00000608858 GFRA3O60609 400 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 ACTN1P12814 892 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 AKR1B1P15121 316 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 G3BP1Q13283 466 aaKnown RBP eCLIP11.27□□□□□ -0.61
CTCFL-220ENST00000608858 CCDC158Q5M9N0 1113 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 FAM83BQ5T0W9 1011 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
CTCFL-220ENST00000608858 FAM117BQ6P1L5 589 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 MAMDC4Q6UXC1 1216 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 CCDC144CPQ8IYA2 1237 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 NUP88Q99567 741 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-220ENST00000608858 AP5M1Q9H0R1 490 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 MCM9Q9NXL9 1143 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
CTCFL-220ENST00000608858 TMX2Q9Y320 296 aa11.27□□□□□ -0.61
CTCFL-220ENST00000608858 TRIOO75962 3097 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 CNTN2Q02246 1040 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 FSCN1Q16658 493 aaKnown RBP11.26□□□□□ -0.61
CTCFL-220ENST00000608858 ARMCX2Q7L311 632 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 EEPD1Q7L9B9 569 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 ANKRD35Q8N283 1001 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 PHOSPHO2Q8TCD6 241 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 SLC9A7Q96T83 725 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 ALDH8A1Q9H2A2 487 aaPredicted RBP11.26□□□□□ -0.61
CTCFL-220ENST00000608858 PDGFCQ9NRA1 345 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 MCM3APO60318 1980 aa11.26□□□□□ -0.61
CTCFL-220ENST00000608858 FOCADQ5VW36 1801 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 SPTBN4Q9H254 2564 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 DNAJC25-GNG10A0A024R161 153 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
CTCFL-220ENST00000608858 CHMP4BP1P59074 171 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 GABPAQ06546 454 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 TMEM179Q6ZVK1 233 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 MSL3Q8N5Y2 521 aaKnown RBP11.25□□□□□ -0.61
CTCFL-220ENST00000608858 REPS2Q8NFH8 660 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 ANTXR1Q9H6X2 564 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 RAVER2Q9HCJ3 691 aaKnown RBP11.25□□□□□ -0.61
CTCFL-220ENST00000608858 MUTYHQ9UIF7 546 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 NOB1Q9ULX3 412 aaKnown RBP11.25□□□□□ -0.61
CTCFL-220ENST00000608858 ROBO3Q96MS0 1386 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 ZDBF2Q9HCK1 2354 aa11.25□□□□□ -0.61
CTCFL-220ENST00000608858 WDR46O15213 610 aaKnown RBP11.24□□□□□ -0.61
CTCFL-220ENST00000608858 CABYRO75952 493 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 IQCF3P0C7M6 154 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 SMPD1P17405 629 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 IRS1P35568 1242 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 ICA1Q05084 483 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 TCF15Q12870 199 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 CLUL1Q15846 466 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 FAM47CQ5HY64 1035 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 TLK2Q86UE8 772 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 RETREG2Q8NC44 543 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 PBXIP1Q96AQ6 731 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 FGD4Q96M96 766 aa11.24□□□□□ -0.61
CTCFL-220ENST00000608858 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms