RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 CCPG1Q9ULG6 757 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 NEDD4P46934 1319 aa22.57■■□□□ 1.2
CTSA-217ENST00000607482 SLC16A2P36021 539 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 MNX1P50219 401 aaPredicted RBP22.56■■□□□ 1.2
CTSA-217ENST00000607482 TRDNQ13061 729 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 SYDE2Q5VT97 1194 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 KAT14Q9H8E8 782 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 ZHX1Q9UKY1 873 aaPredicted RBP22.56■■□□□ 1.2
CTSA-217ENST00000607482 CEP290O15078 2479 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 RAD50Q92878 1312 aa22.56■■□□□ 1.2
CTSA-217ENST00000607482 B4E1Z4 1266 aa22.55■■□□□ 1.2
CTSA-217ENST00000607482 POTEB2H3BUK9 544 aa22.55■■□□□ 1.2
CTSA-217ENST00000607482 XPNPEP3Q9NQH7 507 aa22.55■■□□□ 1.2
CTSA-217ENST00000607482 ZMYND8Q9ULU4 1186 aaPredicted RBP22.55■■□□□ 1.2
CTSA-217ENST00000607482 AKR1A1P14550 325 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 NOVP48745 357 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 ATN1P54259 1190 aaPredicted RBP22.54■■□□□ 1.2
CTSA-217ENST00000607482 TTBK2Q6IQ55 1244 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 RASGRP2Q7LDG7 609 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 DGKHQ86XP1 1220 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 ZNFX1Q9P2E3 1918 aaKnown RBP22.54■■□□□ 1.2
CTSA-217ENST00000607482 PFASO15067 1338 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 SYNGAP1Q96PV0 1343 aa22.54■■□□□ 1.2
CTSA-217ENST00000607482 IGHA2P01877 340 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 COL6A1P12109 1028 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 CHMLP26374 656 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 NSMFQ6X4W1 530 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 KIAA1211Q6ZU35 1233 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 ZNF467Q7Z7K2 595 aaPredicted RBP22.53■■□□□ 1.2
CTSA-217ENST00000607482 RNF180Q86T96 592 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 ZSCAN10Q96SZ4 725 aaPredicted RBP22.53■■□□□ 1.2
CTSA-217ENST00000607482 PRKAG2Q9UGJ0 569 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 PNMA2Q9UL42 364 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 FAM184BQ9ULE4 1060 aa22.53■■□□□ 1.2
CTSA-217ENST00000607482 U3KPZ7 1027 aaPredicted RBP22.53■■□□□ 1.2
CTSA-217ENST00000607482 DNAJC25-GNG10A0A024R161 153 aa22.52■■□□□ 1.2
CTSA-217ENST00000607482 ICAM1P05362 532 aa22.52■■□□□ 1.2
CTSA-217ENST00000607482 PDHBP11177 359 aa22.52■■□□□ 1.2
CTSA-217ENST00000607482 SYN1P17600 705 aa22.52■■□□□ 1.2
CTSA-217ENST00000607482 DHX16O60231 1041 aaKnown RBP22.51■■□□□ 1.19
CTSA-217ENST00000607482 TAL1P17542 331 aaPredicted RBP22.51■■□□□ 1.19
CTSA-217ENST00000607482 ZNF543Q08ER8 600 aa22.51■■□□□ 1.19
CTSA-217ENST00000607482 LRRC26Q2I0M4 334 aa22.51■■□□□ 1.19
CTSA-217ENST00000607482 GPATCH4Q5T3I0 446 aaKnown RBP22.51■■□□□ 1.19
CTSA-217ENST00000607482 NOL8Q76FK4 1167 aaKnown RBP22.51■■□□□ 1.19
CTSA-217ENST00000607482 PNMA1Q8ND90 353 aa22.51■■□□□ 1.19
CTSA-217ENST00000607482 ZSWIM5Q9P217 1185 aa22.51■■□□□ 1.19
CTSA-217ENST00000607482 ZNF536O15090 1300 aa22.51■■□□□ 1.19
CTSA-217ENST00000607482 ACVR2BQ13705 512 aa22.5■■□□□ 1.19
CTSA-217ENST00000607482 MAMDC4Q6UXC1 1216 aa22.5■■□□□ 1.19
CTSA-217ENST00000607482 BTNL9Q6UXG8 535 aa22.5■■□□□ 1.19
CTSA-217ENST00000607482 RALYLQ86SE5 291 aaKnown RBP22.5■■□□□ 1.19
CTSA-217ENST00000607482 RANBP17Q9H2T7 1088 aaKnown RBP22.5■■□□□ 1.19
CTSA-217ENST00000607482 ABHD16BQ9H3Z7 469 aa22.5■■□□□ 1.19
CTSA-217ENST00000607482 SPC25Q9HBM1 224 aa22.5■■□□□ 1.19
CTSA-217ENST00000607482 A1CFQ9NQ94 594 aaKnown RBP22.5■■□□□ 1.19
CTSA-217ENST00000607482 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.5■■□□□ 1.19
CTSA-217ENST00000607482 RBM27Q9P2N5 1060 aaKnown RBP22.5■■□□□ 1.19
CTSA-217ENST00000607482 ERICH2A1L162 156 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 ASB14A6NK59 587 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 PGK1P00558 417 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 ZNF865P0CJ78 1059 aaPredicted RBP22.49■■□□□ 1.19
CTSA-217ENST00000607482 GOLGA8HP0CJ92 632 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 ADCYAP1R1P41586 468 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 CNTN2Q02246 1040 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 LRRC41Q15345 812 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 IFIT1BQ5T764 474 aaKnown RBP22.49■■□□□ 1.19
CTSA-217ENST00000607482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.49■■□□□ 1.19
CTSA-217ENST00000607482 ARMCX2Q7L311 632 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 FERMT2Q96AC1 680 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 ATP11BQ9Y2G3 1177 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 TNKSO95271 1327 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 PLXNA1Q9UIW2 1896 aa22.49■■□□□ 1.19
CTSA-217ENST00000607482 PTPDC1A2A3K4 754 aa22.48■■□□□ 1.19
CTSA-217ENST00000607482 SLC34A2O95436 690 aa22.48■■□□□ 1.19
CTSA-217ENST00000607482 SNAI1O95863 264 aaPredicted RBP22.48■■□□□ 1.19
CTSA-217ENST00000607482 MUM1L1Q5H9M0 696 aa22.48■■□□□ 1.19
CTSA-217ENST00000607482 CENPQQ7L2Z9 268 aaPredicted RBP22.48■■□□□ 1.19
CTSA-217ENST00000607482 CCDC144CPQ8IYA2 1237 aa22.48■■□□□ 1.19
CTSA-217ENST00000607482 LBHD1Q9BQE6 289 aaPredicted RBP22.48■■□□□ 1.19
CTSA-217ENST00000607482 PARP1P09874 1014 aaKnown RBP22.47■■□□□ 1.19
CTSA-217ENST00000607482 SART3Q15020 963 aaKnown RBP22.47■■□□□ 1.19
CTSA-217ENST00000607482 ENAHQ8N8S7 591 aaPredicted RBP22.47■■□□□ 1.19
CTSA-217ENST00000607482 MPHOSPH6Q99547 160 aaKnown RBP22.47■■□□□ 1.19
CTSA-217ENST00000607482 IL25Q9H293 177 aa22.47■■□□□ 1.19
CTSA-217ENST00000607482 ADD3Q9UEY8 706 aaKnown RBP22.47■■□□□ 1.19
CTSA-217ENST00000607482 RTP1P59025 263 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 CCDC144BQ3MJ40 725 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 ASPRV1Q53RT3 343 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 FAM133AQ8N9E0 248 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 UBA5Q9GZZ9 404 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 CYP39A1Q9NYL5 469 aa22.46■■□□□ 1.19
CTSA-217ENST00000607482 SGSM2O43147 1006 aa22.45■■□□□ 1.18
CTSA-217ENST00000607482 PTH1RQ03431 593 aa22.45■■□□□ 1.18
CTSA-217ENST00000607482 USH1GQ495M9 461 aa22.45■■□□□ 1.18
CTSA-217ENST00000607482 SLC39A5Q6ZMH5 540 aa22.45■■□□□ 1.18
CTSA-217ENST00000607482 VTI1AQ96AJ9 217 aa22.45■■□□□ 1.18
CTSA-217ENST00000607482 LENG1Q96BZ8 264 aaPredicted RBP22.45■■□□□ 1.18
CTSA-217ENST00000607482 PRDM5Q9NQX1 630 aaPredicted RBP22.45■■□□□ 1.18
CTSA-217ENST00000607482 IFIT3O14879 490 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms