RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PPARAQ07869 468 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 CCDC174Q6PII3 467 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 MAMDC4Q6UXC1 1216 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 ZNF467Q7Z7K2 595 aaPredicted RBP17.65■□□□□ 0.42
CTSA-216ENST00000607212 NEDD1Q8NHV4 660 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 MAFAQ8NHW3 353 aaPredicted RBP17.65■□□□□ 0.42
CTSA-216ENST00000607212 CHURC1Q8WUH1 139 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 ABHD16BQ9H3Z7 469 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 ACAD9Q9H845 621 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 STX8Q9UNK0 236 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 MROH7Q68CQ1 1323 aa17.65■□□□□ 0.42
CTSA-216ENST00000607212 DNAJC25-GNG10A0A024R161 153 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 MYADML2A6NDP7 307 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 ALAS1P13196 640 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 FAAP100Q0VG06 881 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 CCDC144BQ3MJ40 725 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 GNASQ5JWF2 1037 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 FAM160B2Q86V87 743 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 CCDC144CPQ8IYA2 1237 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 MKL1Q969V6 931 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 TOMM22Q9NS69 142 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 RNF146Q9NTX7 359 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 COL6A3P12111 3177 aa17.64■□□□□ 0.41
CTSA-216ENST00000607212 TLR3O15455 904 aaKnown RBP17.63■□□□□ 0.41
CTSA-216ENST00000607212 ASGR1P07306 291 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 FDX1P10109 184 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 MCCP23508 829 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 EPHB4P54760 987 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 KLHDC9Q8NEP7 349 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 TOX2Q96NM4 488 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 SYNPO2Q9UMS6 1093 aa17.63■□□□□ 0.41
CTSA-216ENST00000607212 A0A0U1RQG5 324 aaPredicted RBP17.62■□□□□ 0.41
CTSA-216ENST00000607212 MX1P20591 662 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 IRX5P78411 483 aaPredicted RBP17.62■□□□□ 0.41
CTSA-216ENST00000607212 CNTN2Q02246 1040 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 CTDSPL2Q05D32 466 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 CCDC96Q2M329 555 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 CCDC129Q6ZRS4 1044 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 KCTD1Q719H9 257 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 ANKRD33Q7Z3H0 272 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
CTSA-216ENST00000607212 STAG1Q8WVM7 1258 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 AGBL1Q96MI9 1066 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 TRERF1Q96PN7 1200 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 COL25A1Q9BXS0 654 aaPredicted RBP17.62■□□□□ 0.41
CTSA-216ENST00000607212 PPP1R12CQ9BZL4 782 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 TTYH1Q9H313 450 aaPredicted RBP17.62■□□□□ 0.41
CTSA-216ENST00000607212 PLIN4Q96Q06 1357 aa17.62■□□□□ 0.41
CTSA-216ENST00000607212 RANBP6O60518 1105 aaKnown RBP17.61■□□□□ 0.41
CTSA-216ENST00000607212 TIMP1P01033 207 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 SNAP25P60880 206 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 BEX3Q00994 111 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 TNFAIP2Q03169 654 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 PPIGQ13427 754 aaKnown RBP eCLIP17.61■□□□□ 0.414e-6■■■■□ 20
CTSA-216ENST00000607212 ZMYM1Q5SVZ6 1142 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 AP5M1Q9H0R1 490 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 ELP1O95163 1332 aa17.61■□□□□ 0.41
CTSA-216ENST00000607212 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.6■□□□□ 0.41
CTSA-216ENST00000607212 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.6■□□□□ 0.41
CTSA-216ENST00000607212 ASB14A6NK59 587 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 ARVCFO00192 962 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 ADCY6O43306 1168 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 CST5P28325 142 aaPredicted RBP17.6■□□□□ 0.41
CTSA-216ENST00000607212 GJA9P57773 515 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 TKFCQ3LXA3 575 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 NSMFQ6X4W1 530 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 TMEM199Q8N511 208 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 PI4K2BQ8TCG2 481 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 GMCL1Q96IK5 515 aa17.6■□□□□ 0.41
CTSA-216ENST00000607212 A1CFQ9NQ94 594 aaKnown RBP17.6■□□□□ 0.41
CTSA-216ENST00000607212 ZEB2O60315 1214 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 DNAJB2P25686 324 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 RRP12Q5JTH9 1297 aaKnown RBP17.59■□□□□ 0.41
CTSA-216ENST00000607212 CCSAPQ6IQ19 270 aaPredicted RBP17.59■□□□□ 0.41
CTSA-216ENST00000607212 MFSD5Q6N075 450 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 EEPD1Q7L9B9 569 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 FGD4Q96M96 766 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 UPF3AQ9H1J1 476 aaKnown RBP17.59■□□□□ 0.41
CTSA-216ENST00000607212 CCPG1Q9ULG6 757 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 PCDHB15Q9Y5E8 787 aa17.59■□□□□ 0.41
CTSA-216ENST00000607212 TMEM265A0A087WTH1 108 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.58■□□□□ 0.4
CTSA-216ENST00000607212 NMT2O60551 498 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 ANKRD45Q5TZF3 282 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 RCSD1Q6JBY9 416 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTSA-216ENST00000607212 TLK2Q86UE8 772 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.58■□□□□ 0.43e-10■□□□□ 10.2
CTSA-216ENST00000607212 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 TBX21Q9UL17 535 aa17.58■□□□□ 0.4
CTSA-216ENST00000607212 DYNC1LI2O43237 492 aaPredicted RBP17.57■□□□□ 0.4
CTSA-216ENST00000607212 ACRP10323 421 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 CSF2RAP15509 400 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 CXCL17Q6UXB2 119 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 FBXO16Q8IX29 292 aaPredicted RBP17.57■□□□□ 0.4
CTSA-216ENST00000607212 FAM133AQ8N9E0 248 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 TIFAQ96CG3 184 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 PRR12Q9ULL5 1215 aa17.57■□□□□ 0.4
CTSA-216ENST00000607212 ZNF536O15090 1300 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms