RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MGAMO43451 1857 aa8.91□□□□□ -0.98
MSH6-211ENST00000606499 SMCHD1A6NHR9 2005 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 ZNF536O15090 1300 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 CNMDO75829 334 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 CDKL5O76039 1030 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 MYCNP04198 464 aaPredicted RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 ANP32AP39687 249 aaKnown RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 TMEM132BQ14DG7 1078 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 QRICH1Q2TAL8 776 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 USH1GQ495M9 461 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 OTUD7BQ6GQQ9 843 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 CPLX2Q6PUV4 134 aaKnown RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 LBX2Q6XYB7 198 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 REM2Q8IYK8 340 aaPredicted RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 CPXCR1Q8N123 301 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 GPKOWQ92917 476 aaPredicted RBP eCLIP8.9□□□□□ -0.98
MSH6-211ENST00000606499 MTMR8Q96EF0 704 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 RRP36Q96EU6 259 aaKnown RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 DDX11Q96FC9 970 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 AGBL1Q96MI9 1066 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 R3HDMLQ9H3Y0 253 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 RAVER2Q9HCJ3 691 aaKnown RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 TXNRD2Q9NNW7 524 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 HOXC10Q9NYD6 342 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 RBPJLQ9UBG7 517 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 CPA4Q9UI42 421 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 ZNF214Q9UL59 606 aaPredicted RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 ADAMTS5Q9UNA0 930 aa8.9□□□□□ -0.98
MSH6-211ENST00000606499 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
MSH6-211ENST00000606499 LCTP09848 1927 aa8.9□□□□□ -0.99
MSH6-211ENST00000606499 CENPFP49454 3210 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 STK36Q9NRP7 1315 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ZBTB5O15062 677 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ZBED4O75132 1171 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 TRPA1O75762 1119 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 TBC1D8O95759 1140 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ICAM1P05362 532 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 FDPSP14324 419 aaKnown RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 SMARCA1P28370 1054 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 SLC4A3P48751 1232 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 SSRP1Q08945 709 aaKnown RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 PLS1Q14651 629 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 PKN1Q16512 942 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 SNRNP48Q6IEG0 339 aaKnown RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 HEATR3Q7Z4Q2 680 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 TRIM22Q8IYM9 498 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ANKRD13CQ8N6S4 541 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 SPRYD3Q8NCJ5 442 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 SMARCC2Q8TAQ2 1214 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 AIFM3Q96NN9 605 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 RNF26Q9BY78 433 aaPredicted RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 HOMER2Q9NSB8 354 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 RNF186Q9NXI6 227 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 SEC63Q9UGP8 760 aaKnown RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 CCPG1Q9ULG6 757 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
MSH6-211ENST00000606499 ZNF236Q9UL36 1845 aa8.89□□□□□ -0.99
MSH6-211ENST00000606499 PRPF3O43395 683 aaKnown RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 CA12O43570 354 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 TLR2O60603 784 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 ECM2O94769 699 aaPredicted RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 DEXIO95424 95 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 FDX1P10109 184 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 SCG2P13521 617 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 GJB2P29033 226 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 GCLCP48506 637 aaPredicted RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 FOSBP53539 338 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 ERVK-9P63128 1117 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 ERVK-24P63145 666 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 BECN1Q14457 450 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 PFKFB3Q16875 520 aaPredicted RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 C17orf99Q6UX52 265 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 FBXO11Q86XK2 927 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 MB21D1Q8N884 522 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 GTF3C2Q8WUA4 911 aaPredicted RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 COA7Q96BR5 231 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 LLPHQ9BRT6 129 aaKnown RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 MOV10L1Q9BXT6 1211 aaKnown RBP8.88□□□□□ -0.99
MSH6-211ENST00000606499 TEX13BQ9BXU2 312 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 SPATC1LQ9H0A9 340 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 GJB4Q9NTQ9 266 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 MORF4L1Q9UBU8 362 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 RABGAP1Q9Y3P9 1069 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 RIPK3Q9Y572 518 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 LRRC37A2A6NM11 1700 aa8.88□□□□□ -0.99
MSH6-211ENST00000606499 PLXNA1Q9UIW2 1896 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 STXBP3O00186 592 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 OPLAHO14841 1288 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 ATP2A1O14983 1001 aa8.87□□□□□ -0.99
MSH6-211ENST00000606499 HSP90AA1P07900 732 aaKnown RBP8.87□□□□□ -0.99
MSH6-211ENST00000606499 BCRP11274 1271 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms