RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
CTSA-212ENST00000606394 NKX2-4Q9H2Z4 354 aa16.01■□□□□ 0.15
CTSA-212ENST00000606394 HIPK3Q9H422 1215 aa16.01■□□□□ 0.15
CTSA-212ENST00000606394 BAZ2AQ9UIF9 1905 aaKnown RBP16■□□□□ 0.15
CTSA-212ENST00000606394 USP17L12C9JPN9 530 aa16■□□□□ 0.15
CTSA-212ENST00000606394 USP17L21D6R901 530 aa16■□□□□ 0.15
CTSA-212ENST00000606394 ADCY6O43306 1168 aa16■□□□□ 0.15
CTSA-212ENST00000606394 POU3F3P20264 500 aaPredicted RBP16■□□□□ 0.15
CTSA-212ENST00000606394 CYP2C18P33260 490 aa16■□□□□ 0.15
CTSA-212ENST00000606394 CEP85Q6P2H3 762 aa16■□□□□ 0.15
CTSA-212ENST00000606394 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
CTSA-212ENST00000606394 EXOC6BQ9Y2D4 811 aa16■□□□□ 0.15
CTSA-212ENST00000606394 YBX2Q9Y2T7 364 aaKnown RBP16■□□□□ 0.15
CTSA-212ENST00000606394 RIPK3Q9Y572 518 aa16■□□□□ 0.15
CTSA-212ENST00000606394 PCDHA11Q9Y5I1 949 aa16■□□□□ 0.15
CTSA-212ENST00000606394 ERC2O15083 957 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 CTAGE5O15320 804 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 PRKAB2O43741 272 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 RAD21O60216 631 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 ZBED4O75132 1171 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 MBD4O95243 580 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 ADD2P35612 726 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 OAZ1P54368 228 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 PPP2R2DQ66LE6 453 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 ARMCX2Q7L311 632 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 ITPRIPQ8IWB1 547 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 ANKRD35Q8N283 1001 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 CLASRPQ8N2M8 674 aaKnown RBP15.99■□□□□ 0.15
CTSA-212ENST00000606394 CHST13Q8NET6 341 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 RHPN1Q8TCX5 695 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 DNAJC2Q99543 621 aaKnown RBP15.99■□□□□ 0.15
CTSA-212ENST00000606394 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.99■□□□□ 0.15
CTSA-212ENST00000606394 NYAP2Q9P242 653 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 GBF1Q92538 1859 aa15.99■□□□□ 0.15
CTSA-212ENST00000606394 CYP2D7A0A087X1C5 515 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 F5H6K3 240 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 IRX5P78411 483 aaPredicted RBP15.98■□□□□ 0.15
CTSA-212ENST00000606394 KLRC3Q07444 240 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 OTOP2Q7RTS6 562 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 FGD4Q96M96 766 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTSA-212ENST00000606394 KATNBL1Q9H079 304 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 SYNPO2Q9UMS6 1093 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 HCN4Q9Y3Q4 1203 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
CTSA-212ENST00000606394 SLC4A7Q9Y6M7 1214 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 MCM3APO60318 1980 aa15.98■□□□□ 0.15
CTSA-212ENST00000606394 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
CTSA-212ENST00000606394 TCF20Q9UGU0 1960 aaKnown RBP15.97■□□□□ 0.15
CTSA-212ENST00000606394 ZEB2O60315 1214 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 FDX1P10109 184 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 UBE3CQ15386 1083 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 CPXCR1Q8N123 301 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 NOC4LQ9BVI4 516 aaKnown RBP15.97■□□□□ 0.15
CTSA-212ENST00000606394 IL1RAPL2Q9NP60 686 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 ARPP21Q9UBL0 812 aaPredicted RBP15.97■□□□□ 0.15
CTSA-212ENST00000606394 COG5Q9UP83 839 aa15.97■□□□□ 0.15
CTSA-212ENST00000606394 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
CTSA-212ENST00000606394 GREB1LQ9C091 1923 aaPredicted RBP15.97■□□□□ 0.15
CTSA-212ENST00000606394 SMIM22K7EJ46 135 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 GTPBP6O43824 516 aaPredicted RBP15.96■□□□□ 0.15
CTSA-212ENST00000606394 NDUFB10O96000 172 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 PFKMP08237 780 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 IFIT2P09913 472 aaKnown RBP15.96■□□□□ 0.15
CTSA-212ENST00000606394 TNFAIP2Q03169 654 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 ITGA7Q13683 1181 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 CTR9Q6PD62 1173 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 KIF1BPQ96EK5 621 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 NECAB3Q96P71 396 aaPredicted RBP15.96■□□□□ 0.15
CTSA-212ENST00000606394 NUP88Q99567 741 aaPredicted RBP15.96■□□□□ 0.15
CTSA-212ENST00000606394 FEM1BQ9UK73 627 aa15.96■□□□□ 0.15
CTSA-212ENST00000606394 GNEQ9Y223 722 aaKnown RBP15.96■□□□□ 0.15
CTSA-212ENST00000606394 MUC6Q6W4X9 2439 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 ATP2A2P16615 1042 aaKnown RBP15.95■□□□□ 0.14
CTSA-212ENST00000606394 TFF2Q03403 129 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 FSCN1Q16658 493 aaKnown RBP15.95■□□□□ 0.14
CTSA-212ENST00000606394 CXCL17Q6UXB2 119 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 CRBNQ96SW2 442 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 Q9Y3F1 56 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 SLC4A4Q9Y6R1 1079 aa15.95■□□□□ 0.14
CTSA-212ENST00000606394 UMODL1Q5DID0 1318 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 ASB14A6NK59 587 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 RABGGTBP53611 331 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 CCL23P55773 120 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 BEX3Q00994 111 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 SBK1Q52WX2 424 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 ZSCAN25Q6NSZ9 544 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
CTSA-212ENST00000606394 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
CTSA-212ENST00000606394 MICALL1Q8N3F8 863 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 FAM133AQ8N9E0 248 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 MKL1Q969V6 931 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 KIFC2Q96AC6 838 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 LRFN3Q9BTN0 628 aa15.94■□□□□ 0.14
CTSA-212ENST00000606394 AP5M1Q9H0R1 490 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms