RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	KLHL14	Q9P2G3	628 aa		6.63	□□□□□ -1.35
LAMA4-222	ENST00000604740	IMPACT	Q9P2X3	320 aa		6.63	□□□□□ -1.35
LAMA4-222	ENST00000604740	ZNRF3	Q9ULT6	936 aa		6.63	□□□□□ -1.35
LAMA4-222	ENST00000604740		A0A0G2JLL6	359 aa	Predicted RBP	6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	GSN	P06396	782 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	ACR	P10323	421 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	TMEM62	Q0P6H9	643 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	CWF19L1	Q69YN2	538 aa	Known RBP	6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	MZB1	Q8WU39	189 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	RELT	Q969Z4	430 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	FERD3L	Q96RJ6	166 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	JMJD8	Q96S16	334 aa		6.62	□□□□□ -1.35
LAMA4-222	ENST00000604740	NISCH	Q9Y2I1	1504 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740		A0A1W2PQ27	194 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740		A0A1W2PQ64	194 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740		A0A1W2PQC6	194 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740		A0A1W2PQD8	194 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	IRS4	O14654	1257 aa	Predicted RBP	6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	SHOX	O15266	292 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	GSTM1	P09488	218 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	IMPDH2	P12268	514 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	ZNF76	P36508	570 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	CEBPA	P49715	358 aa	Predicted RBP	6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	FBXW10	Q5XX13	1052 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	INTS3	Q68E01	1043 aa	Known RBP	6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	USP48	Q86UV5	1035 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	DACT3	Q96B18	629 aa	Predicted RBP	6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	TNFRSF12A	Q9NP84	129 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	FAM86C1	Q9NVL1	165 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740	ACSL6	Q9UKU0	697 aa		6.61	□□□□□ -1.35
LAMA4-222	ENST00000604740		H0Y8X5	98 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	PMS1	P54277	932 aa	Known RBP	6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	VMAC	Q2NL98	169 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	RTP2	Q5QGT7	225 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	DCAF15	Q66K64	600 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	CNKSR3	Q6P9H4	555 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	PPFIBP1	Q86W92	1011 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	LDHD	Q86WU2	507 aa		6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	SMARCC1	Q92922	1105 aa	Predicted RBP	6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	6.6	□□□□□ -1.35
LAMA4-222	ENST00000604740	SASH1	O94885	1247 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	ZNF394	Q53GI3	561 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	NOL9	Q5SY16	702 aa	Known RBP	6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	LDLRAD1	Q5T700	205 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	RPTN	Q6XPR3	784 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	JAML	Q86YT9	394 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	IGDCC3	Q8IVU1	814 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	TMEFF1	Q8IYR6	380 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	TMEM52	Q8NDY8	209 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	SLC12A9	Q9BXP2	914 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	KRTAP4-11	Q9BYQ6	195 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	PCDHGB7	Q9Y5F8	929 aa		6.59	□□□□□ -1.35
LAMA4-222	ENST00000604740	ADAMTS20	P59510	1910 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	TP53	P04637	393 aa	Predicted RBP	6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZNF16	P17020	682 aa	Predicted RBP	6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	NCKAP1L	P55160	1127 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	NFIX	Q14938	502 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	PLEKHN1	Q494U1	663 aa	Predicted RBP	6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	HLA-DQA1	Q5Y7H0	255 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	FAM129C	Q86XR2	697 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	TAB3	Q8N5C8	712 aa	Predicted RBP	6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	BRF1	Q92994	677 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	TM9SF2	Q99805	663 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	GP6	Q9HCN6	339 aa		6.58	□□□□□ -1.36
LAMA4-222	ENST00000604740	BUB1B	O60566	1050 aa	Predicted RBP	6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	MSL3P1	P0C860	447 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZNF445	P59923	1031 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	FANCC	Q00597	558 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	MVK	Q03426	396 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZYX	Q15942	572 aa	Known RBP	6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZC3H14	Q6PJT7	736 aa	Known RBP	6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	CYP2R1	Q6VVX0	501 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	BACH2	Q9BYV9	841 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	PPT2	Q9UMR5	302 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740	PCDHA5	Q9Y5H7	936 aa		6.57	□□□□□ -1.36
LAMA4-222	ENST00000604740		A0A1W2PQJ5	194 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	OTOL1	A6NHN0	477 aa	Predicted RBP	6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	FOXD2	O60548	495 aa	Predicted RBP	6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	GUCY2C	P25092	1073 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	ZNF200	P98182	395 aa	Predicted RBP	6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	CBX2	Q14781	532 aa	Predicted RBP	6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	RUFY4	Q6ZNE9	571 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	SP8	Q8IXZ3	490 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	FIBCD1	Q8N539	461 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	FEZF2	Q8TBJ5	459 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	PWWP2A	Q96N64	755 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	XYLT2	Q9H1B5	865 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	RTEL1	Q9NZ71	1219 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	FHOD1	Q9Y613	1164 aa		6.56	□□□□□ -1.36
LAMA4-222	ENST00000604740	FGF10	O15520	208 aa	Predicted RBP	6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	ITGA4	P13612	1032 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	SYN1	P17600	705 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	CD247	P20963	164 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	NOP2	P46087	812 aa	Known RBP	6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	MAPKAPK2	P49137	400 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	NR1I3	Q14994	352 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	ANKRD39	Q53RE8	183 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	LCE5A	Q5TCM9	118 aa		6.55	□□□□□ -1.36
LAMA4-222	ENST00000604740	UNC5A	Q6ZN44	842 aa		6.55	□□□□□ -1.36

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