RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 PP2D1A8MPX8 630 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 NONOQ15233 471 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 LETM2Q2VYF4 491 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 GPATCH4Q5T3I0 446 aaKnown RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 CCDC186Q7Z3E2 898 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 KRT25Q7Z3Z0 450 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 SH3RF1Q7Z6J0 888 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 C17orf53Q8N3J3 647 aaPredicted RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 MKL1Q969V6 931 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 MRFAP1L1Q96HT8 127 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 NYAP2Q9P242 653 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 ZNRF3Q9ULT6 936 aa12.32□□□□□ -0.44
LINC01235-201ENST00000604724 COL2A1P02458 1487 aaPredicted RBP12.32□□□□□ -0.44
LINC01235-201ENST00000604724 PNMA6FA0A0J9YX94 578 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 CCNT1O60563 726 aaKnown RBP12.31□□□□□ -0.44
LINC01235-201ENST00000604724 GH2P01242 217 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
LINC01235-201ENST00000604724 MORC3Q14149 939 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 TMEM179Q6ZVK1 233 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 OGFOD1Q8N543 542 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 TBCKQ8TEA7 893 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 PPP1R1BQ9UD71 204 aaPredicted RBP12.31□□□□□ -0.44
LINC01235-201ENST00000604724 CNTNAP1P78357 1384 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 hCG_1984214I3L0E3 225 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 IKBKBO14920 756 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 CDC25BP30305 580 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 SLC1A4P43007 532 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 CXCL9Q07325 125 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 ZNF713Q8N859 430 aaPredicted RBP12.31□□□□□ -0.44
LINC01235-201ENST00000604724 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
LINC01235-201ENST00000604724 MTRQ99707 1265 aa12.31□□□□□ -0.44
LINC01235-201ENST00000604724 FER1L6Q2WGJ9 1857 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 EDIL3O43854 480 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
LINC01235-201ENST00000604724 ADCY7P51828 1080 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 TGFB2P61812 414 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 MYL5Q02045 173 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 FMR1Q06787 632 aaKnown RBP eCLIP12.3□□□□□ -0.44
LINC01235-201ENST00000604724 LRMPQ12912 555 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 KARSQ15046 597 aaKnown RBP12.3□□□□□ -0.44
LINC01235-201ENST00000604724 PDXDC2PQ6P474 469 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 DTHD1Q6ZMT9 781 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 MTMR8Q96EF0 704 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 TMOD2Q9NZR1 351 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 HDAC9Q9UKV0 1011 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 PYCARDQ9ULZ3 195 aa12.3□□□□□ -0.44
LINC01235-201ENST00000604724 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 A0A1W2PRG0 241 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 F5H6K3 240 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 ZBTB5O15062 677 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 KLRC3Q07444 240 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 DPYDQ12882 1025 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 UBE2SQ16763 222 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 SPDYE2Q495Y8 402 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 SMTNL1A8MU46 457 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 ARID5BQ14865 1188 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 DALRD3Q5D0E6 543 aaKnown RBP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 PPP4R3BQ5MIZ7 849 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 RBM26Q5T8P6 1007 aaKnown RBP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 IQUBQ8NA54 791 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 DCAF4Q8WV16 495 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 MED15Q96RN5 788 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 BLZF1Q9H2G9 400 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC01235-201ENST00000604724 IFNKQ9P0W0 207 aa12.29□□□□□ -0.44
LINC01235-201ENST00000604724 NFKBIEO00221 500 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 NEMFO60524 1076 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 NDUFB10O96000 172 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 SNAP25P60880 206 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 QRICH1Q2TAL8 776 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 HSP90AA4PQ58FG1 418 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 TRMT44Q8IYL2 757 aaKnown RBP12.28□□□□□ -0.44
LINC01235-201ENST00000604724 LRRC15Q8TF66 581 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 FAM151AQ8WW52 585 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 TAOK3Q9H2K8 898 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 FANCLQ9NW38 375 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.28□□□□□ -0.44
LINC01235-201ENST00000604724 SMC2O95347 1197 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 TDP2O95551 362 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 OR52Z1P0C646 297 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 POLD1P28340 1107 aa12.28□□□□□ -0.44
LINC01235-201ENST00000604724 PRPHP41219 470 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms