RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
LINC01109-201ENST00000603837 VASH1Q7L8A9 365 aaPredicted RBP5.3□□□□□ -1.56
LINC01109-201ENST00000603837 TMEM151BQ8IW70 566 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 TEX19Q8NA77 164 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 B4GALNT2Q8NHY0 566 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 TBC1D5Q92609 795 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 SKA1Q96BD8 255 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 THUMPD2Q9BTF0 503 aaKnown RBP5.3□□□□□ -1.56
LINC01109-201ENST00000603837 MYO6Q9UM54 1294 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 PCDHB9Q9Y5E1 797 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 TRPM2O94759 1503 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 H3BQF6 201 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 J3QL48 77 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 KATNA1O75449 491 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ALDH1B1P30837 517 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 MCM2P49736 904 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ATP2B2Q01814 1243 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 USP4Q13107 963 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 PAK2Q13177 524 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 LAMB3Q13751 1172 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 C21orf62-AS1Q17RA5 79 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 KLHL10Q6JEL2 608 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 OR8H2Q8N162 312 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 KCT2Q8NC54 265 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 CDK15Q96Q40 435 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 STK31Q9BXU1 1019 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 VPS33BQ9H267 617 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 PLEKHA4Q9H4M7 779 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 AASDHPPTQ9NRN7 309 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 C6orf203Q9P0P8 240 aaPredicted RBP5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ZDHHC9Q9Y397 364 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 PPP2R3BQ9Y5P8 575 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 WASF2Q9Y6W5 498 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ERBINQ96RT1 1412 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 NKTRP30414 1462 aaKnown RBP5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ABCA6Q8N139 1617 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 KIDINS220Q9ULH0 1771 aa5.3□□□□□ -1.56
LINC01109-201ENST00000603837 ENO4A6NNW6 628 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 RTCAO00442 366 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 TSPAN6O43657 245 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 RTN3O95197 1032 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CYP1A2P05177 515 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 VIL1P09327 827 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 MTHFD1P11586 935 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 NCAM1P13591 858 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SLFN5Q08AF3 891 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 LAPTM4AQ15012 233 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 PKN2Q16513 984 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 KIF4BQ2VIQ3 1234 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 MTHFD1LQ6UB35 978 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 OLFML1Q6UWY5 402 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ANKRD24Q8TF21 1146 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SPDL1Q96EA4 605 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ASIC4Q96FT7 647 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 HOMER3Q9NSC5 361 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 FANCLQ9NW38 375 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SAGE1Q9NXZ1 904 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 HOXC10Q9NYD6 342 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 GTF3C4Q9UKN8 822 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CDV3Q9UKY7 258 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 TET3O43151 1660 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 NRG2O14511 850 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 HOXD10P28358 340 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 UBR7Q8N806 425 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 LSM14AQ8ND56 463 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 LRRN4CLQ8ND94 238 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 LILRB1Q8NHL6 650 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 PGBD4Q96DM1 585 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 HAUS7Q99871 368 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 TSGA10Q9BZW7 698 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 UNC45AQ9H3U1 944 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CCSER2Q9H7U1 834 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 L2HGDHQ9H9P8 463 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 PRKAB1Q9Y478 270 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SPATA31D1Q6ZQQ2 1576 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SIGLEC1Q9BZZ2 1709 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 FAM187AA6NFU0 413 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 USP27XA6NNY8 438 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SCAMP3O14828 347 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ALDH1L1O75891 902 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ADH1CP00326 375 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 INPP5BP32019 993 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 SESN3P58005 492 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 UBXN2AP68543 259 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ATP7AQ04656 1500 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 MRPL28Q13084 256 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 TTF1Q15361 905 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 MAP7D1Q3KQU3 841 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 FILIP1LQ4L180 1135 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 RRP12Q5JTH9 1297 aaKnown RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CCDC158Q5M9N0 1113 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ACBD5Q5T8D3 534 aaPredicted RBP5.29□□□□□ -1.56
LINC01109-201ENST00000603837 WLSQ5T9L3 541 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 CFAP161Q6P656 301 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 KIAA0825Q8IV33 1275 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 ARL6IP6Q8N6S5 226 aa5.29□□□□□ -1.56
LINC01109-201ENST00000603837 TCP11Q8WWU5 503 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms