RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 HPS5Q9UPZ3 1129 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 EPB41L2O43491 1005 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 RCOR1Q9UKL0 485 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 COL22A1Q8NFW1 1626 aaPredicted RBP17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 PLEKHA8P1O95397 391 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 SRGNP10124 158 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 ADRA2BP18089 450 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 IRAK4Q9NWZ3 460 aa17.19■□□□□ 0.34
PPFIA3-206ENST00000602655 TJP1Q07157 1748 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 SH2B2O14492 632 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 NLRP12P59046 1061 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 CAPZA3Q96KX2 299 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 MRPL44Q9H9J2 332 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■■■■■ 63.3
PPFIA3-206ENST00000602655 COL1A1P02452 1464 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 BAG3O95817 575 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 MYL5Q02045 173 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 NR5A1Q13285 461 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 NOA1Q8NC60 698 aaKnown RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 WDR66Q8TBY9 1149 aa17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 ZKSCAN4Q969J2 545 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
PPFIA3-206ENST00000602655 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 BBOX1O75936 387 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 LONRF3Q496Y0 759 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 AMOTL1Q8IY63 956 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 LY9Q9HBG7 655 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 LEMD3Q9Y2U8 911 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 SOWAHDA6NJG2 315 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 PPP1R12BO60237 982 aaPredicted RBP17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 ATP1A2P50993 1020 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 NCAPH2Q6IBW4 605 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 ZNF654Q8IZM8 581 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 CCDC114Q96M63 670 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 KRT23Q9C075 422 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 CLIC4Q9Y696 253 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 SSRP1Q08945 709 aaKnown RBP17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 NBPF20Q3BBV1 942 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 PPFIBP1Q86W92 1011 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 SLC35F6Q8N357 371 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 IGDCC4Q8TDY8 1250 aa17.17■□□□□ 0.34
PPFIA3-206ENST00000602655 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 NOC3LQ8WTT2 800 aaKnown RBP17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 BRIP1Q9BX63 1249 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 NRAPQ86VF7 1730 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 KIF28PB7ZC32 967 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 KIFC2Q96AC6 838 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 RNF41Q9H4P4 317 aaPredicted RBP17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 USP40Q9NVE5 1235 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 GNAT2P19087 354 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 SPTY2D1Q68D10 685 aaPredicted RBP17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 KRT40Q6A162 431 aa17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
PPFIA3-206ENST00000602655 A0A0U1RQJ8 604 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 BAG6P46379 1132 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 ENAHQ8N8S7 591 aaPredicted RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 ATRIPQ8WXE1 791 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 GOLGA6BA6NDN3 693 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 TULP1O00294 542 aaPredicted RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 STX10O60499 249 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 B4GALNT4Q76KP1 1039 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 CATIPQ7Z7H3 387 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 KLC4Q9NSK0 619 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 NUP188Q5SRE5 1749 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 BTAF1O14981 1849 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 PDE4BQ07343 736 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 LRRC47Q8N1G4 583 aaKnown RBP17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 ENGASEQ8NFI3 743 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
PPFIA3-206ENST00000602655 ENO4A6NNW6 628 aa17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 ZNF274Q96GC6 653 aaPredicted RBP17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 NFIAQ12857 509 aa17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 PDCLQ13371 301 aa17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 FMR1NBQ8N0W7 255 aaPredicted RBP17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 ZSCAN10Q96SZ4 725 aaPredicted RBP17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
PPFIA3-206ENST00000602655 SYF2O95926 243 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms