RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	CNGA1	P29973	690 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	SLC16A2	P36021	539 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	ZNF543	Q08ER8	600 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	SYDE2	Q5VT97	1194 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	ENAH	Q8N8S7	591 aa	Predicted RBP	18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	DDX11	Q96FC9	970 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	TINF2	Q9BSI4	451 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	RANBP17	Q9H2T7	1088 aa	Known RBP	18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	HOMER2	Q9NSB8	354 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	LCT	P09848	1927 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	TNKS	O95271	1327 aa		18.19	■□□□□ 0.5
PLD3-223	ENST00000600948	TKFC	Q3LXA3	575 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	BMP2KL	Q5H9B9	411 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	PRAMEF19	Q5SWL8	479 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	CCDC174	Q6PII3	467 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	PNMA1	Q8ND90	353 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	DPF3	Q92784	378 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	MAP4K1	Q92918	833 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	ACAD9	Q9H845	621 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	RNF146	Q9NTX7	359 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	TAF6L	Q9Y6J9	622 aa		18.18	■□□□□ 0.5
PLD3-223	ENST00000600948	MYH6	P13533	1939 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	SEPT4	O43236	478 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	CYB5R4	Q7L1T6	521 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	ANKRD35	Q8N283	1001 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	CCDC136	Q96JN2	1154 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	FGD4	Q96M96	766 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	C11orf49	Q9H6J7	331 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	KAT14	Q9H8E8	782 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	NRBP1	Q9UHY1	535 aa		18.17	■□□□□ 0.5
PLD3-223	ENST00000600948	ICAM1	P05362	532 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	ALAS1	P13196	640 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	GPATCH4	Q5T3I0	446 aa	Known RBP	18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	MSL3	Q8N5Y2	521 aa	Known RBP	18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	TRERF1	Q96PN7	1200 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	ESYT1	Q9BSJ8	1104 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	UBAC1	Q9BSL1	405 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	A1CF	Q9NQ94	594 aa	Known RBP	18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	CCPG1	Q9ULG6	757 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	RBM8A	Q9Y5S9	174 aa	Known RBP	18.16	■□□□□ 0.5
PLD3-223	ENST00000600948	PFAS	O15067	1338 aa		18.16	■□□□□ 0.5
PLD3-223	ENST00000600948		E7EWF7	191 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948		H0YGN5	161 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	COL6A1	P12109	1028 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	TAL1	P17542	331 aa	Predicted RBP	18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	TRDN	Q13061	729 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	SEC23A	Q15436	765 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	MUM1L1	Q5H9M0	696 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	MAMDC4	Q6UXC1	1216 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	STOX1	Q6ZVD7	989 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	LSG1	Q9H089	658 aa	Known RBP	18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	SYNGAP1	Q96PV0	1343 aa		18.15	■□□□□ 0.5
PLD3-223	ENST00000600948	ZNF865	P0CJ78	1059 aa	Predicted RBP	18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	GOLGA8H	P0CJ92	632 aa		18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	CNTN2	Q02246	1040 aa		18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	ANO1	Q5XXA6	986 aa		18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	FAM133A	Q8N9E0	248 aa		18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	LRRC37A2	A6NM11	1700 aa		18.14	■□□□□ 0.49
PLD3-223	ENST00000600948	POTEB2	H3BUK9	544 aa		18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	SNAI1	O95863	264 aa	Predicted RBP	18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	IFIT1B	Q5T764	474 aa	Known RBP	18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	KIAA1211	Q6ZU35	1233 aa		18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	UBA5	Q9GZZ9	404 aa		18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	CPVL	Q9H3G5	476 aa		18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	CNPY2	Q9Y2B0	182 aa		18.13	■□□□□ 0.49
PLD3-223	ENST00000600948	EVI5	O60447	810 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	ASPRV1	Q53RT3	343 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	RALYL	Q86SE5	291 aa	Known RBP	18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	NCOA7	Q8NI08	942 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	CYP39A1	Q9NYL5	469 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	NR2E3	Q9Y5X4	410 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	WDR19	Q8NEZ3	1342 aa		18.12	■□□□□ 0.49
PLD3-223	ENST00000600948	SOWAHB	A6NEL2	793 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	DNM1L	O00429	736 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	NEFL	P07196	543 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	ARMCX2	Q7L311	632 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	PNMA2	Q9UL42	364 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	ASTN1	O14525	1302 aa		18.11	■□□□□ 0.49
PLD3-223	ENST00000600948	NFIB	O00712	420 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	IFIT3	O14879	490 aa	Known RBP	18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	PARP1	P09874	1014 aa	Known RBP	18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	AKR1A1	P14550	325 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	ANTXR2	P58335	489 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	GJC2	Q5T442	439 aa	Predicted RBP	18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	NSMF	Q6X4W1	530 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	CCDC144CP	Q8IYA2	1237 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	ARRDC4	Q8NCT1	418 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	CLEC4D	Q8WXI8	215 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	ANO2	Q9NQ90	1003 aa		18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	ZHX1	Q9UKY1	873 aa	Predicted RBP	18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.1	■□□□□ 0.49
PLD3-223	ENST00000600948	SLC27A2	O14975	620 aa		18.09	■□□□□ 0.49
PLD3-223	ENST00000600948	RARB	P10826	455 aa		18.09	■□□□□ 0.49
PLD3-223	ENST00000600948	ACVR2B	Q13705	512 aa		18.09	■□□□□ 0.49
PLD3-223	ENST00000600948	NECTIN1	Q15223	517 aa		18.09	■□□□□ 0.49
PLD3-223	ENST00000600948	LRRC41	Q15345	812 aa		18.09	■□□□□ 0.49
PLD3-223	ENST00000600948	CHST3	Q7LGC8	479 aa		18.09	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms