RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	CYP2D7	A0A087X1C5	515 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	ARHGEF15	O94989	841 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	CCL23	P55773	120 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	BEX3	Q00994	111 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	SKIV2L	Q15477	1246 aa	Known RBP	13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	SNRNP48	Q6IEG0	339 aa	Known RBP	13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	TEX13B	Q9BXU2	312 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	ABHD16B	Q9H3Z7	469 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	CD320	Q9NPF0	282 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	SLC4A7	Q9Y6M7	1214 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	COL4A4	P53420	1690 aa	Predicted RBP	13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	ZNF532	Q9HCE3	1301 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	CFAP54	Q96N23	3096 aa		13.36	□□□□□ -0.27
NUP62-222	ENST00000600935	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	PRKAB2	O43741	272 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	CA3	P07451	260 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	PTGS1	P23219	599 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	CDK8	P49336	464 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	SLC9C2	Q5TAH2	1124 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	CXCL17	Q6UXB2	119 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	ARMCX2	Q7L311	632 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	ALYREF	Q86V81	257 aa	Known RBP	13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	AGBL1	Q96MI9	1066 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	NUP88	Q99567	741 aa	Predicted RBP	13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	TRPV6	Q9H1D0	765 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	SPC25	Q9HBM1	224 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	COG5	Q9UP83	839 aa		13.35	□□□□□ -0.27
NUP62-222	ENST00000600935	ATP2A1	O14983	1001 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	B4GALT4	O60513	344 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	ATP2A2	P16615	1042 aa	Known RBP	13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	TTLL4	Q14679	1199 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	SLFNL1	Q499Z3	407 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	C12orf60	Q5U649	245 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	C16orf86	Q6ZW13	317 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	TMEM57	Q8N5G2	664 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	CLUAP1	Q96AJ1	413 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	DDX11	Q96FC9	970 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	SCLY	Q96I15	445 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	CCDC17	Q96LX7	622 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	SLF1	Q9BQI6	1058 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	C1orf115	Q9H7X2	142 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	CERS4	Q9HA82	394 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	GNE	Q9Y223	722 aa	Known RBP	13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	PTPRS	Q13332	1948 aa		13.34	□□□□□ -0.27
NUP62-222	ENST00000600935	ITGA7	Q13683	1181 aa		13.33	□□□□□ -0.28
NUP62-222	ENST00000600935	CCDC144CP	Q8IYA2	1237 aa		13.33	□□□□□ -0.28
NUP62-222	ENST00000600935	ARMT1	Q9H993	441 aa		13.33	□□□□□ -0.28
NUP62-222	ENST00000600935	KANSL2	Q9H9L4	492 aa		13.33	□□□□□ -0.28
NUP62-222	ENST00000600935	GOPC	Q9HD26	462 aa		13.33	□□□□□ -0.28
NUP62-222	ENST00000600935	ZBBX	A8MT70	800 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	PI4K2B	G5E9Z4	385 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	LPXN	O60711	386 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	TAP1	Q03518	808 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	TMEM67	Q5HYA8	995 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	SPRED2	Q7Z698	418 aa		13.32	□□□□□ -0.28
NUP62-222	ENST00000600935	TET1	Q8NFU7	2136 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	LCT	P09848	1927 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	MYO15A	Q9UKN7	3530 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	USP17L12	C9JPN9	530 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	USP17L21	D6R901	530 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	GTPBP6	O43824	516 aa	Predicted RBP	13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	CABYR	O75952	493 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	PSMC6	P62333	389 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	CNTN2	Q02246	1040 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	FSCN1	Q16658	493 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	TMEM63B	Q5T3F8	832 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	TLK2	Q86UE8	772 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	AACS	Q86V21	672 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	RPUSD2	Q8IZ73	545 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	CPXCR1	Q8N123	301 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	HLA-C	Q95604	372 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	ATP8A2	Q9NTI2	1148 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	DDX49	Q9Y6V7	483 aa	Known RBP	13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	ZBED9	Q6R2W3	1325 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	TANC1	Q9C0D5	1861 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	MYH4	Q9Y623	1939 aa		13.31	□□□□□ -0.28
NUP62-222	ENST00000600935	IPO8	O15397	1037 aa	Known RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	RAD21	O60216	631 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	MBD4	O95243	580 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	NDUFB10	O96000	172 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	CHGB	P05060	677 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	TNFAIP2	Q03169	654 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	GRB10	Q13322	594 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	TTF1	Q15361	905 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	ANKRD35	Q8N283	1001 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	FAM133A	Q8N9E0	248 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	PRPF38A	Q8NAV1	312 aa	Known RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	ARNTL2	Q8WYA1	636 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	FRAT1	Q92837	279 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	SLC38A10	Q9HBR0	1119 aa		13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	RAVER2	Q9HCJ3	691 aa	Known RBP	13.3	□□□□□ -0.28
NUP62-222	ENST00000600935	DMD	P11532	3685 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935	SOWAHB	A6NEL2	793 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935		F5H6K3	240 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935	GOLIM4	O00461	696 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935	SMPD1	P17405	629 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935	SLC4A3	P48751	1232 aa		13.29	□□□□□ -0.28
NUP62-222	ENST00000600935	KLRC3	Q07444	240 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms