RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 RPTORQ8N122 1335 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 LRRC37A2A6NM11 1700 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 PGK2P07205 417 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 GOLGA8HP0CJ92 632 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 FCER1AP12319 257 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 IFIT1BQ5T764 474 aaKnown RBP18.47■□□□□ 0.55
RPS28-203ENST00000600659 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 RASEFQ8IZ41 740 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 IGDCC4Q8TDY8 1250 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 MAML3Q96JK9 1138 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 FGD4Q96M96 766 aa18.47■□□□□ 0.55
RPS28-203ENST00000600659 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
RPS28-203ENST00000600659 ALPK3Q96L96 1907 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 CCND3P30281 292 aaPredicted RBP18.46■□□□□ 0.55
RPS28-203ENST00000600659 SLC35G1Q2M3R5 365 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 GPATCH4Q5T3I0 446 aaKnown RBP18.46■□□□□ 0.55
RPS28-203ENST00000600659 OLFML2BQ68BL8 750 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 CCDC174Q6PII3 467 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
RPS28-203ENST00000600659 TRPV1Q8NER1 839 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 CHST13Q8NET6 341 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
RPS28-203ENST00000600659 CRISPLD2Q9H0B8 497 aa18.46■□□□□ 0.55
RPS28-203ENST00000600659 SGPL1O95470 568 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 ICAM1P05362 532 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 CYP2C19P33261 490 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
RPS28-203ENST00000600659 TSGA10IPQ3SY00 556 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 MUM1L1Q5H9M0 696 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 CASC1Q6TDU7 716 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 DPP9Q86TI2 863 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 STAG2Q8N3U4 1231 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 KCNB2Q92953 911 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 DEFB118Q96PH6 123 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 LY9Q9HBG7 655 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 HMX1Q9NP08 348 aaPredicted RBP18.45■□□□□ 0.54
RPS28-203ENST00000600659 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
RPS28-203ENST00000600659 IFIT3O14879 490 aaKnown RBP18.44■□□□□ 0.54
RPS28-203ENST00000600659 CYBAP13498 195 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 TROAPQ12815 778 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 KCTD2Q14681 263 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 ASPRV1Q53RT3 343 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 MTA3Q9BTC8 594 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 UBA5Q9GZZ9 404 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
RPS28-203ENST00000600659 HOMER2Q9NSB8 354 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
RPS28-203ENST00000600659 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
RPS28-203ENST00000600659 PALM3A6NDB9 673 aaPredicted RBP18.43■□□□□ 0.54
RPS28-203ENST00000600659 SLC4A3P48751 1232 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 MNX1P50219 401 aaPredicted RBP18.43■□□□□ 0.54
RPS28-203ENST00000600659 TKFCQ3LXA3 575 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 ADCK5Q3MIX3 580 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 LHX8Q68G74 356 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 ACAD9Q9H845 621 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 FBXO40Q9UH90 709 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
RPS28-203ENST00000600659 ASTN1O14525 1302 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 WDR19Q8NEZ3 1342 aa18.43■□□□□ 0.54
RPS28-203ENST00000600659 SH2B2O14492 632 aaPredicted RBP18.42■□□□□ 0.54
RPS28-203ENST00000600659 PRC1O43663 620 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
RPS28-203ENST00000600659 ALAS1P13196 640 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 GRM4Q14833 912 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 WTAPQ15007 396 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 TMEM67Q5HYA8 995 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 MFSD14CQ5VZR4 134 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 FAM133AQ8N9E0 248 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 CCPG1Q9ULG6 757 aa18.42■□□□□ 0.54
RPS28-203ENST00000600659 MCM5P33992 734 aa18.41■□□□□ 0.54
RPS28-203ENST00000600659 HSPA4P34932 840 aa18.41■□□□□ 0.54
RPS28-203ENST00000600659 ADGRF4Q8IZF3 695 aa18.41■□□□□ 0.54
RPS28-203ENST00000600659 CLEC4DQ8WXI8 215 aa18.41■□□□□ 0.54
RPS28-203ENST00000600659 MTMR8Q96EF0 704 aa18.41■□□□□ 0.54
RPS28-203ENST00000600659 NFIBO00712 420 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 CDC37Q16543 378 aaPredicted RBP18.4■□□□□ 0.54
RPS28-203ENST00000600659 RNF20Q5VTR2 975 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 MAMDC4Q6UXC1 1216 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 TINF2Q9BSI4 451 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 LRRC2Q9BYS8 371 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 JMJD4Q9H9V9 463 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 SLC5A4Q9NY91 659 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 CYP39A1Q9NYL5 469 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
RPS28-203ENST00000600659 CYTH3O43739 400 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
RPS28-203ENST00000600659 CNTN2Q02246 1040 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 SART3Q15020 963 aaKnown RBP18.39■□□□□ 0.53
RPS28-203ENST00000600659 PRAMEF19Q5SWL8 479 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 ZNF467Q7Z7K2 595 aaPredicted RBP18.39■□□□□ 0.53
RPS28-203ENST00000600659 ANKRD35Q8N283 1001 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 DDX11Q96FC9 970 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 TMEM87BQ96K49 555 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 MYL10Q9BUA6 226 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 SNX14Q9Y5W7 946 aa18.39■□□□□ 0.53
RPS28-203ENST00000600659 ERICH2A1L162 156 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 SOWAHBA6NEL2 793 aa18.38■□□□□ 0.53
RPS28-203ENST00000600659 KLRF2D3W0D1 207 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms