RNA–Protein interactions for RNA: ENST00000599808.1

HOMER3-211, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-211ENST00000599808 NDUFB10O96000 172 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 CD4P01730 458 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 ATP5JP18859 108 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 MRPS5P82675 430 aaKnown RBP14.78□□□□□ -0.04
HOMER3-211ENST00000599808 KLRC3Q07444 240 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 UBE3CQ15386 1083 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.78□□□□□ -0.04
HOMER3-211ENST00000599808 ARMCX2Q7L311 632 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 HERVK_113Q902F9 699 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 KATNBL1Q9H079 304 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 PUS7LQ9H0K6 701 aaKnown RBP14.78□□□□□ -0.04
HOMER3-211ENST00000599808 IL23AQ9NPF7 189 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 NYAP2Q9P242 653 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 MSRAQ9UJ68 235 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 TRANK1O15050 2925 aa14.78□□□□□ -0.04
HOMER3-211ENST00000599808 TLR3O15455 904 aaKnown RBP14.77□□□□□ -0.05
HOMER3-211ENST00000599808 ZBED4O75132 1171 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 RASA1P20936 1047 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 IGFBP4P22692 258 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 RAB30Q15771 203 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 CCDC144CPQ8IYA2 1237 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 STK11IPQ8N1F8 1099 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 UHRF1Q96T88 793 aaPredicted RBP14.77□□□□□ -0.05
HOMER3-211ENST00000599808 HAUS7Q99871 368 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 NKX2-4Q9H2Z4 354 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 SLC38A10Q9HBR0 1119 aa14.77□□□□□ -0.05
HOMER3-211ENST00000599808 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
HOMER3-211ENST00000599808 ARPP21Q9UBL0 812 aaPredicted RBP14.77□□□□□ -0.05
HOMER3-211ENST00000599808 YBX2Q9Y2T7 364 aaKnown RBP14.77□□□□□ -0.05
HOMER3-211ENST00000599808 ASTN1O14525 1302 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 UMODL1Q5DID0 1318 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 LRRC37A2A6NM11 1700 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 NKX3-2P78367 333 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 BEX3Q00994 111 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 SIRT2Q8IXJ6 389 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 SLC43A3Q8NBI5 491 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 KIFC2Q96AC6 838 aa14.76□□□□□ -0.05
HOMER3-211ENST00000599808 PRRC2BQ5JSZ5 2229 aaKnown RBP14.76□□□□□ -0.05
HOMER3-211ENST00000599808 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.75□□□□□ -0.05
HOMER3-211ENST00000599808 FGBP02675 491 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 CNTN2Q02246 1040 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 SBK1Q52WX2 424 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 CXCL17Q6UXB2 119 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 CHST13Q8NET6 341 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 MTIF3Q9H2K0 278 aaKnown RBP14.75□□□□□ -0.05
HOMER3-211ENST00000599808 HIPK3Q9H422 1215 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 SLC28A3Q9HAS3 691 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 MKNK2Q9HBH9 465 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 CLIP2Q9UDT6 1046 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 FBXO40Q9UH90 709 aa14.75□□□□□ -0.05
HOMER3-211ENST00000599808 CTDP1Q9Y5B0 961 aaPredicted RBP14.75□□□□□ -0.05
HOMER3-211ENST00000599808 IGKV6D-41A0A0C4DH26 115 aa14.74□□□□□ -0.05
HOMER3-211ENST00000599808 RAB11FIP3O75154 756 aa14.74□□□□□ -0.05
HOMER3-211ENST00000599808 TNFAIP2Q03169 654 aa14.74□□□□□ -0.05
HOMER3-211ENST00000599808 OTOP2Q7RTS6 562 aa14.74□□□□□ -0.05
HOMER3-211ENST00000599808 RPAP2Q8IXW5 612 aaPredicted RBP14.74□□□□□ -0.05
HOMER3-211ENST00000599808 STRBPQ96SI9 672 aaKnown RBP14.74□□□□□ -0.05
HOMER3-211ENST00000599808 HOMER2Q9NSB8 354 aa14.74□□□□□ -0.05
HOMER3-211ENST00000599808 SCN5AQ14524 2016 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 GRIN2DO15399 1336 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 LCTP09848 1927 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 GSG1L2A8MUP6 293 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 MINDY4BA8MYZ0 360 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 HMMRO75330 724 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 PTGS1P23219 599 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 RABGGTBP53611 331 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 OAZ1P54368 228 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 CCL23P55773 120 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 ZSCAN25Q6NSZ9 544 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 NOL8Q76FK4 1167 aaKnown RBP14.73□□□□□ -0.05
HOMER3-211ENST00000599808 FAM133AQ8N9E0 248 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 IL27Q8NEV9 243 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 NECAB3Q96P71 396 aaPredicted RBP14.73□□□□□ -0.05
HOMER3-211ENST00000599808 NOC4LQ9BVI4 516 aaKnown RBP14.73□□□□□ -0.05
HOMER3-211ENST00000599808 FEM1BQ9UK73 627 aa14.73□□□□□ -0.05
HOMER3-211ENST00000599808 GNEQ9Y223 722 aaKnown RBP14.73□□□□□ -0.05
HOMER3-211ENST00000599808 CABYRO75952 493 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 MYOGP15173 224 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 PLA2G5P39877 138 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 ITGA7Q13683 1181 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 TLK2Q86UE8 772 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
HOMER3-211ENST00000599808 MKL1Q969V6 931 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 VWCEQ96DN2 955 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 CEP95Q96GE4 821 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 TRPV6Q9H1D0 765 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 WNT8AQ9H1J5 351 aa14.72□□□□□ -0.05
HOMER3-211ENST00000599808 DDX49Q9Y6V7 483 aaKnown RBP14.72□□□□□ -0.05
HOMER3-211ENST00000599808 SOWAHBA6NEL2 793 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 B4GALT4O60513 344 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 PRDM1O75626 825 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 BMP1P13497 986 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 TFF2Q03403 129 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 FSCN1Q16658 493 aaKnown RBP14.71□□□□□ -0.05
HOMER3-211ENST00000599808 PPP2R2DQ66LE6 453 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 GIMAP6Q6P9H5 292 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 MICALL1Q8N3F8 863 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 GMCL1P1Q8NEA9 526 aa14.71□□□□□ -0.05
HOMER3-211ENST00000599808 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms