RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 FDX1P10109 184 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 CNGA1P29973 690 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 SLC4A3P48751 1232 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 ZNF543Q08ER8 600 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 CCDC96Q2M329 555 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 MUM1L1Q5H9M0 696 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 CCDC174Q6PII3 467 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 MAMDC4Q6UXC1 1216 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 CYB5R4Q7L1T6 521 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 ENAHQ8N8S7 591 aaPredicted RBP14.31□□□□□ -0.12
LIG1-217ENST00000599165 CHST13Q8NET6 341 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 A1CFQ9NQ94 594 aaKnown RBP14.31□□□□□ -0.12
LIG1-217ENST00000599165 HOMER2Q9NSB8 354 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 SLC5A4Q9NY91 659 aa14.31□□□□□ -0.12
LIG1-217ENST00000599165 COLQQ9Y215 455 aaPredicted RBP14.31□□□□□ -0.12
LIG1-217ENST00000599165 ADCY6O43306 1168 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 MSCO60682 206 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 CNTN2Q02246 1040 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
LIG1-217ENST00000599165 IMMTQ16891 758 aaKnown RBP14.3□□□□□ -0.12
LIG1-217ENST00000599165 SYDE2Q5VT97 1194 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 STOX1Q6ZVD7 989 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 DGKHQ86XP1 1220 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 FAM133AQ8N9E0 248 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 LENG1Q96BZ8 264 aaPredicted RBP14.3□□□□□ -0.12
LIG1-217ENST00000599165 KATNBL1Q9H079 304 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 CPVLQ9H3G5 476 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 GPCPD1Q9NPB8 672 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 RNF146Q9NTX7 359 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 ISY1Q9ULR0 285 aaKnown RBP14.3□□□□□ -0.12
LIG1-217ENST00000599165 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
LIG1-217ENST00000599165 MYH6P13533 1939 aa14.3□□□□□ -0.12
LIG1-217ENST00000599165 SOWAHBA6NEL2 793 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 GOLGA8HP0CJ92 632 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 IKQ13123 557 aaPredicted RBP14.29□□□□□ -0.12
LIG1-217ENST00000599165 SEC23AQ15436 765 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 HABP4Q5JVS0 413 aaKnown RBP14.29□□□□□ -0.12
LIG1-217ENST00000599165 ZNF467Q7Z7K2 595 aaPredicted RBP14.29□□□□□ -0.12
LIG1-217ENST00000599165 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 TRERF1Q96PN7 1200 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 PURBQ96QR8 312 aaKnown RBP14.29□□□□□ -0.12
LIG1-217ENST00000599165 ZSCAN10Q96SZ4 725 aaPredicted RBP14.29□□□□□ -0.12
LIG1-217ENST00000599165 ACAD9Q9H845 621 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 FBXO40Q9UH90 709 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 CTNNA3Q9UI47 895 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 TNKSO95271 1327 aa14.29□□□□□ -0.12
LIG1-217ENST00000599165 DNM1LO00429 736 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 EVI5O60447 810 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 SLC34A2O95436 690 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 ICAM1P05362 532 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 ALAS1P13196 640 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 NT5C2P49902 561 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 LAMA3Q16787 3333 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 TKFCQ3LXA3 575 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 GJC2Q5T442 439 aaPredicted RBP14.28□□□□□ -0.12
LIG1-217ENST00000599165 DNAH12Q6ZR08 3092 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
LIG1-217ENST00000599165 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 MSL3Q8N5Y2 521 aaKnown RBP14.28□□□□□ -0.12
LIG1-217ENST00000599165 PNMA1Q8ND90 353 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 MAP4K1Q92918 833 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 SYNGAP1Q96PV0 1343 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 SENP2Q9HC62 589 aa14.28□□□□□ -0.12
LIG1-217ENST00000599165 CTDP1Q9Y5B0 961 aaPredicted RBP14.28□□□□□ -0.12
LIG1-217ENST00000599165 BAZ2BQ9UIF8 2168 aaKnown RBP14.27□□□□□ -0.12
LIG1-217ENST00000599165 LTBP2Q14767 1821 aa14.27□□□□□ -0.12
LIG1-217ENST00000599165 ADAMTS4O75173 837 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
LIG1-217ENST00000599165 LRRC41Q15345 812 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 RUFY2Q8WXA3 655 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 CLEC4DQ8WXI8 215 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 LSG1Q9H089 658 aaKnown RBP14.27□□□□□ -0.13
LIG1-217ENST00000599165 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.27□□□□□ -0.13
LIG1-217ENST00000599165 CYP39A1Q9NYL5 469 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 CCPG1Q9ULG6 757 aa14.27□□□□□ -0.13
LIG1-217ENST00000599165 NFIBO00712 420 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 ANTXR2P58335 489 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 IQCA1Q86XH1 822 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 CCDC144CPQ8IYA2 1237 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 KRT23Q9C075 422 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
LIG1-217ENST00000599165 UBA5Q9GZZ9 404 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 RBM27Q9P2N5 1060 aaKnown RBP14.26□□□□□ -0.13
LIG1-217ENST00000599165 ZMYND8Q9ULU4 1186 aaPredicted RBP14.26□□□□□ -0.13
LIG1-217ENST00000599165 NR2E3Q9Y5X4 410 aa14.26□□□□□ -0.13
LIG1-217ENST00000599165 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
LIG1-217ENST00000599165 WDR19Q8NEZ3 1342 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 MYADML2A6NDP7 307 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 E7EWF7 191 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 PGK1P00558 417 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 PTGS1P23219 599 aa14.25□□□□□ -0.13
LIG1-217ENST00000599165 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms