RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 MCTP1Q6DN14 999 aa24.1■■□□□ 1.45
COPE-208ENST00000598969 SAMD1Q6SPF0 538 aaPredicted RBP24.1■■□□□ 1.45
COPE-208ENST00000598969 ZBTB48P10074 688 aaPredicted RBP24.09■■□□□ 1.45
COPE-208ENST00000598969 TRIM29Q14134 588 aa24.09■■□□□ 1.45
COPE-208ENST00000598969 PHF20Q9BVI0 1012 aa24.09■■□□□ 1.45
COPE-208ENST00000598969 SH3GLB2Q9NR46 395 aa24.09■■□□□ 1.45
COPE-208ENST00000598969 TMEM88BA6NKF7 163 aa24.08■■□□□ 1.45
COPE-208ENST00000598969 HOXA7P31268 230 aaPredicted RBP24.08■■□□□ 1.45
COPE-208ENST00000598969 GPAT2Q6NUI2 795 aa24.08■■□□□ 1.45
COPE-208ENST00000598969 FASTKD5Q7L8L6 764 aaKnown RBP24.08■■□□□ 1.45
COPE-208ENST00000598969 RASAL3Q86YV0 1011 aa24.08■■□□□ 1.45
COPE-208ENST00000598969 COA7Q96BR5 231 aa24.08■■□□□ 1.45
COPE-208ENST00000598969 AGTPBP1Q9UPW5 1226 aa24.08■■□□□ 1.45
COPE-208ENST00000598969 MMP1P03956 469 aa24.08■■□□□ 1.44
COPE-208ENST00000598969 XBP1P17861 261 aa24.08■■□□□ 1.44
COPE-208ENST00000598969 DSG3P32926 999 aa24.08■■□□□ 1.44
COPE-208ENST00000598969 ZNF157P51786 506 aaPredicted RBP24.08■■□□□ 1.44
COPE-208ENST00000598969 NPY5RQ15761 445 aa24.08■■□□□ 1.44
COPE-208ENST00000598969 RGMBQ6NW40 437 aa24.08■■□□□ 1.44
COPE-208ENST00000598969 hCG_1984214I3L0E3 225 aa24.07■■□□□ 1.44
COPE-208ENST00000598969 GTF2A2P52657 109 aa24.07■■□□□ 1.44
COPE-208ENST00000598969 COG2Q14746 738 aa24.07■■□□□ 1.44
COPE-208ENST00000598969 FERMT3Q86UX7 667 aa24.07■■□□□ 1.44
COPE-208ENST00000598969 ZNF713Q8N859 430 aaPredicted RBP24.07■■□□□ 1.44
COPE-208ENST00000598969 ATG4CQ96DT6 458 aa24.07■■□□□ 1.44
COPE-208ENST00000598969 SLC38A10Q9HBR0 1119 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 ADAMTS5Q9UNA0 930 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 CETPP11597 493 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 KIF23Q02241 960 aaPredicted RBP24.06■■□□□ 1.44
COPE-208ENST00000598969 CCDC174Q6PII3 467 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 FBXO11Q86XK2 927 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 BRI3BPQ8WY22 251 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 AMNQ9BXJ7 453 aa24.06■■□□□ 1.44
COPE-208ENST00000598969 ABT1Q9ULW3 272 aaKnown RBP24.06■■□□□ 1.44
COPE-208ENST00000598969 MYPNQ86TC9 1320 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 SPDYE16A6NNV3 312 aaPredicted RBP24.05■■□□□ 1.44
COPE-208ENST00000598969 KIF28PB7ZC32 967 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 VWA5AO00534 786 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 ADAMTS3O15072 1205 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 TAL1P17542 331 aaPredicted RBP24.05■■□□□ 1.44
COPE-208ENST00000598969 NAPAP54920 295 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 RESTQ13127 1097 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 SKOR2Q2VWA4 1001 aaPredicted RBP24.05■■□□□ 1.44
COPE-208ENST00000598969 FAM177A1Q8N128 213 aaPredicted RBP24.05■■□□□ 1.44
COPE-208ENST00000598969 PCDHA1Q9Y5I3 950 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 ZNF536O15090 1300 aa24.05■■□□□ 1.44
COPE-208ENST00000598969 CCL15-CCL14A0A0B4J2E2 113 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 SLC10A3P09131 477 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 NLRP5P59047 1200 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 CCL15Q16663 113 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 REPS2Q8NFH8 660 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 CCDC148Q8NFR7 591 aa24.04■■□□□ 1.44
COPE-208ENST00000598969 ZSCAN16Q9H4T2 348 aaPredicted RBP24.04■■□□□ 1.44
COPE-208ENST00000598969 POTEEQ6S8J3 1075 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 DIS3L2Q8IYB7 885 aaKnown RBP24.03■■□□□ 1.44
COPE-208ENST00000598969 OXER1Q8TDS5 423 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 ZMYND12Q9H0C1 365 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 HOXC10Q9NYD6 342 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 FAM155AB1AL88 458 aaPredicted RBP24.03■■□□□ 1.44
COPE-208ENST00000598969 BTBD18B2RXH4 712 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 FDX1P10109 184 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 USH1GQ495M9 461 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 PPP1R18Q6NYC8 613 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 CCDC12Q8WUD4 166 aaPredicted RBP24.03■■□□□ 1.44
COPE-208ENST00000598969 HHIPL1Q96JK4 782 aa24.03■■□□□ 1.44
COPE-208ENST00000598969 P2RX7Q99572 595 aaKnown RBP24.03■■□□□ 1.44
COPE-208ENST00000598969 ASCC2Q9H1I8 757 aaPredicted RBP24.03■■□□□ 1.44
COPE-208ENST00000598969 MYH15Q9Y2K3 1946 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 ESYT2A0FGR8 921 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 BTBD19C9JJ37 291 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 TRAK2O60296 914 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 ZBED4O75132 1171 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 FOXD4L6Q3SYB3 417 aaPredicted RBP24.02■■□□□ 1.44
COPE-208ENST00000598969 FOXD4L3Q6VB84 417 aaPredicted RBP24.02■■□□□ 1.44
COPE-208ENST00000598969 AGBL1Q96MI9 1066 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 SMCHD1A6NHR9 2005 aa24.02■■□□□ 1.44
COPE-208ENST00000598969 SMCO2A6NFE2 343 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 ICAM1P05362 532 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 U2AF2P26368 475 aaKnown RBP eCLIP24.01■■□□□ 1.43
COPE-208ENST00000598969 CALML3P27482 149 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 IRX3P78415 501 aaPredicted RBP24.01■■□□□ 1.43
COPE-208ENST00000598969 NR5A1Q13285 461 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 SAFBQ15424 915 aaKnown RBP eCLIP24.01■■□□□ 1.43
COPE-208ENST00000598969 DAGLBQ8NCG7 672 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 RAVER2Q9HCJ3 691 aaKnown RBP24.01■■□□□ 1.43
COPE-208ENST00000598969 PCDHA4Q9UN74 947 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 TESPA1A2RU30 521 aaPredicted RBP24.01■■□□□ 1.43
COPE-208ENST00000598969 KRT2P35908 639 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 PABPC4Q13310 644 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■□□□ 13.7
COPE-208ENST00000598969 CSPP1Q1MSJ5 1256 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 PTPN18Q99952 460 aa24.01■■□□□ 1.43
COPE-208ENST00000598969 FOXP1Q9H334 677 aaPredicted RBP24.01■■□□□ 1.43
COPE-208ENST00000598969 COL11A1P12107 1806 aaPredicted RBP24■■□□□ 1.43
COPE-208ENST00000598969 GALNT17Q6IS24 598 aa24■■□□□ 1.43
COPE-208ENST00000598969 FAM173BQ6P4H8 233 aa24■■□□□ 1.43
COPE-208ENST00000598969 ANKRD23Q86SG2 305 aa24■■□□□ 1.43
COPE-208ENST00000598969 BLIDQ8IZY5 108 aa24■■□□□ 1.43
COPE-208ENST00000598969 CPXCR1Q8N123 301 aa24■■□□□ 1.43
COPE-208ENST00000598969 TNFRSF25Q93038 417 aa24■■□□□ 1.43
COPE-208ENST00000598969 CHAMP1Q96JM3 812 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms